RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W DSL1P53847 754 aa5.42□□□□□ -1.54
PRP40YKL012W BNA5Q05979 453 aa5.42□□□□□ -1.54
PRP40YKL012W HER1Q12276 1246 aa5.42□□□□□ -1.54
PRP40YKL012W BUB3P26449 341 aa5.41□□□□□ -1.54
PRP40YKL012W RRP1P35178 278 aaPredicted RBP5.41□□□□□ -1.54
PRP40YKL012W OLA1P38219 394 aaKnown RBP5.41□□□□□ -1.54
PRP40YKL012W ESBP6P53918 673 aa5.41□□□□□ -1.54
PRP40YKL012W MSS11Q03825 758 aa5.41□□□□□ -1.54
PRP40YKL012W YDR387CQ04162 555 aa5.41□□□□□ -1.54
PRP40YKL012W SEG1Q04279 960 aa5.41□□□□□ -1.54
PRP40YKL012W BSC1Q12140 328 aa5.41□□□□□ -1.54
PRP40YKL012W BUG1Q12191 341 aa5.41□□□□□ -1.54
PRP40YKL012W UBX3Q12229 455 aa5.41□□□□□ -1.54
PRP40YKL012W FAA1P30624 700 aaKnown RBP5.4□□□□□ -1.54
PRP40YKL012W RRF1P38771 230 aa5.4□□□□□ -1.54
PRP40YKL012W PHO86P46956 311 aa5.4□□□□□ -1.54
PRP40YKL012W GPI8P49018 411 aa5.4□□□□□ -1.54
PRP40YKL012W YIF1P53845 314 aaKnown RBP5.4□□□□□ -1.54
PRP40YKL012W PDR16P53860 351 aaKnown RBP5.4□□□□□ -1.54
PRP40YKL012W AIM17P23180 465 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W VPS17P32913 551 aa5.39□□□□□ -1.55
PRP40YKL012W STN1P38960 494 aa5.39□□□□□ -1.55
PRP40YKL012W PCL6P40038 420 aa5.39□□□□□ -1.55
PRP40YKL012W TRS85P46944 698 aa5.39□□□□□ -1.55
PRP40YKL012W XRN1P22147 1528 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W YPT1P01123 206 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W RPL42AP0CX27 106 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W RPL42BP0CX28 106 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W UBA1P22515 1024 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W RPI1P23250 407 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W ACH1P32316 526 aa5.39□□□□□ -1.55
PRP40YKL012W ECM15P35195 104 aa5.39□□□□□ -1.55
PRP40YKL012W RRP4P38792 359 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W SHE4P51534 789 aa5.39□□□□□ -1.55
PRP40YKL012W CUE3P53137 624 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W PIB2P53191 635 aa5.39□□□□□ -1.55
PRP40YKL012W ADA2Q02336 434 aa5.39□□□□□ -1.55
PRP40YKL012W YDR541CQ03049 344 aa5.39□□□□□ -1.55
PRP40YKL012W COQ11Q05892 277 aa5.39□□□□□ -1.55
PRP40YKL012W NRT1Q08485 598 aa5.39□□□□□ -1.55
PRP40YKL012W LSP1Q12230 341 aaKnown RBP5.39□□□□□ -1.55
PRP40YKL012W RUP1Q12242 671 aa5.39□□□□□ -1.55
PRP40YKL012W YNL162W-AQ3E7A8 72 aa5.39□□□□□ -1.55
PRP40YKL012W HSP104P31539 908 aaKnown RBP5.38□□□□□ -1.55
PRP40YKL012W SMY1P32364 656 aaKnown RBP5.38□□□□□ -1.55
PRP40YKL012W APE2P32454 952 aaKnown RBP5.38□□□□□ -1.55
PRP40YKL012W PEX2P32800 271 aa5.38□□□□□ -1.55
PRP40YKL012W GAT2P40209 560 aa5.38□□□□□ -1.55
PRP40YKL012W PSA1P41940 361 aaKnown RBP5.38□□□□□ -1.55
PRP40YKL012W TAF12Q03761 539 aa5.38□□□□□ -1.55
PRP40YKL012W RIM13Q03792 727 aa5.38□□□□□ -1.55
PRP40YKL012W NDJ1Q12366 352 aa5.38□□□□□ -1.55
PRP40YKL012W AMD1P15274 810 aaKnown RBP5.37□□□□□ -1.55
PRP40YKL012W MDM10P18409 493 aa5.37□□□□□ -1.55
PRP40YKL012W EXO70P19658 623 aa5.37□□□□□ -1.55
PRP40YKL012W ECM25P32525 599 aa5.37□□□□□ -1.55
PRP40YKL012W FRE1P32791 686 aa5.37□□□□□ -1.55
PRP40YKL012W MIC60P36112 540 aa5.37□□□□□ -1.55
PRP40YKL012W GUF1P46943 645 aa5.37□□□□□ -1.55
PRP40YKL012W ROG1P53118 685 aa5.37□□□□□ -1.55
PRP40YKL012W YMR087WQ04299 284 aa5.37□□□□□ -1.55
PRP40YKL012W MGR3Q04472 501 aa5.37□□□□□ -1.55
PRP40YKL012W NBL1Q3E7Y6 73 aa5.37□□□□□ -1.55
PRP40YKL012W HIS4P00815 799 aaKnown RBP5.37□□□□□ -1.55
PRP40YKL012W MGR1P25573 417 aa5.37□□□□□ -1.55
PRP40YKL012W PHO91P27514 894 aa5.37□□□□□ -1.55
PRP40YKL012W GPI16P38875 610 aa5.37□□□□□ -1.55
PRP40YKL012W YIL089WP40500 205 aa5.37□□□□□ -1.55
PRP40YKL012W YPS6P40583 537 aa5.37□□□□□ -1.55
PRP40YKL012W ASN2P49090 572 aaKnown RBP5.37□□□□□ -1.55
PRP40YKL012W YIP5P53108 310 aa5.37□□□□□ -1.55
PRP40YKL012W YGL082WP53155 381 aa5.37□□□□□ -1.55
PRP40YKL012W YNR068CP53754 272 aa5.37□□□□□ -1.55
PRP40YKL012W TDA7P53882 636 aaPredicted RBP5.37□□□□□ -1.55
PRP40YKL012W YNL143CP53908 130 aa5.37□□□□□ -1.55
PRP40YKL012W AQR1P53943 586 aa5.37□□□□□ -1.55
PRP40YKL012W BET4Q00618 327 aa5.37□□□□□ -1.55
PRP40YKL012W SYO1Q07395 620 aa5.37□□□□□ -1.55
PRP40YKL012W SRN2Q99176 213 aa5.37□□□□□ -1.55
PRP40YKL012W TAL1P15019 335 aaKnown RBP5.36□□□□□ -1.55
PRP40YKL012W SEC62P21825 274 aa5.36□□□□□ -1.55
PRP40YKL012W PCF11P39081 626 aaPredicted RBP5.36□□□□□ -1.55
PRP40YKL012W EFM3P47163 339 aa5.36□□□□□ -1.55
PRP40YKL012W GIP3Q03016 1276 aa5.36□□□□□ -1.55
PRP40YKL012W NSE1Q07913 336 aa5.36□□□□□ -1.55
PRP40YKL012W YCP4P25349 247 aaKnown RBP5.35□□□□□ -1.55
PRP40YKL012W CRM1P30822 1084 aaKnown RBP5.35□□□□□ -1.55
PRP40YKL012W NDI1P32340 513 aa5.35□□□□□ -1.55
PRP40YKL012W XBP1P40489 647 aa5.35□□□□□ -1.55
PRP40YKL012W PCP1P53259 346 aa5.35□□□□□ -1.55
PRP40YKL012W PRO2P54885 456 aaKnown RBP5.35□□□□□ -1.55
PRP40YKL012W YMR254CQ04838 102 aa5.35□□□□□ -1.55
PRP40YKL012W THI7Q05998 598 aa5.35□□□□□ -1.55
PRP40YKL012W MRPL51Q06090 140 aaPredicted RBP5.35□□□□□ -1.55
PRP40YKL012W SPH1Q06160 661 aa5.35□□□□□ -1.55
PRP40YKL012W REV3P14284 1504 aa5.35□□□□□ -1.55
PRP40YKL012W HNM1P19807 563 aa5.34□□□□□ -1.55
PRP40YKL012W YNK1P36010 153 aaKnown RBP5.34□□□□□ -1.55
PRP40YKL012W CUE2P36075 443 aaKnown RBP5.34□□□□□ -1.55
PRP40YKL012W YAL037WP39728 267 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms