RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W HEL2Q05580 639 aaKnown RBP3.39□□□□□ -1.87
BCD1YHR040W YLR345WQ06137 509 aa3.39□□□□□ -1.87
BCD1YHR040W RRP9Q06506 573 aaKnown RBP3.39□□□□□ -1.87
BCD1YHR040W YLR012CQ07927 99 aa3.39□□□□□ -1.87
BCD1YHR040W OSW1Q08692 278 aa3.39□□□□□ -1.87
BCD1YHR040W UAF30Q08747 228 aa3.39□□□□□ -1.87
BCD1YHR040W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
BCD1YHR040W LEA1Q08963 238 aaPredicted RBP3.39□□□□□ -1.87
BCD1YHR040W YPR202WQ08993 238 aa3.39□□□□□ -1.87
BCD1YHR040W RCN2Q12044 265 aa3.39□□□□□ -1.87
BCD1YHR040W SMF3Q12078 473 aaPredicted RBP3.39□□□□□ -1.87
BCD1YHR040W NMD4Q12129 218 aa3.39□□□□□ -1.87
BCD1YHR040W COX17Q12287 69 aa3.39□□□□□ -1.87
BCD1YHR040W HSP42Q12329 375 aa3.39□□□□□ -1.87
BCD1YHR040W AHA1Q12449 350 aaKnown RBP3.39□□□□□ -1.87
BCD1YHR040W OCA6Q12454 224 aa3.39□□□□□ -1.87
BCD1YHR040W ADF1Q2V2Q1 113 aa3.39□□□□□ -1.87
BCD1YHR040W AFI1Q99222 893 aa3.39□□□□□ -1.87
BCD1YHR040W SAS5Q99314 248 aa3.39□□□□□ -1.87
BCD1YHR040W GCN1P33892 2672 aaKnown RBP3.39□□□□□ -1.87
BCD1YHR040W YLR302CO13544 120 aa3.38□□□□□ -1.87
BCD1YHR040W YPR089WO13585 888 aa3.38□□□□□ -1.87
BCD1YHR040W CBP2P03874 630 aaPredicted RBP3.38□□□□□ -1.87
BCD1YHR040W RPL24AP04449 155 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W ERG20P08524 352 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W RSR1P13856 272 aa3.38□□□□□ -1.87
BCD1YHR040W ABF1P14164 731 aa3.38□□□□□ -1.87
BCD1YHR040W YSP3P25036 478 aa3.38□□□□□ -1.87
BCD1YHR040W ERG6P25087 383 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W HCM1P25364 564 aa3.38□□□□□ -1.87
BCD1YHR040W RPL5P26321 297 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W ADK2P26364 225 aa3.38□□□□□ -1.87
BCD1YHR040W PHO91P27514 894 aa3.38□□□□□ -1.87
BCD1YHR040W PRE4P30657 266 aa3.38□□□□□ -1.87
BCD1YHR040W ZIP1P31111 875 aa3.38□□□□□ -1.87
BCD1YHR040W PUP2P32379 260 aa3.38□□□□□ -1.87
BCD1YHR040W AEP1P32493 518 aa3.38□□□□□ -1.87
BCD1YHR040W RPN2P32565 945 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W COX13P32799 129 aa3.38□□□□□ -1.87
BCD1YHR040W MDL1P33310 695 aa3.38□□□□□ -1.87
BCD1YHR040W SGE1P33335 543 aa3.38□□□□□ -1.87
BCD1YHR040W SIP2P34164 415 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W RMA1P36001 430 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W STB6P36085 766 aa3.38□□□□□ -1.87
BCD1YHR040W UIP5P36137 443 aa3.38□□□□□ -1.87
BCD1YHR040W MRPL40P36534 297 aa3.38□□□□□ -1.87
BCD1YHR040W ATG12P38316 186 aa3.38□□□□□ -1.87
BCD1YHR040W SIC1P38634 284 aa3.38□□□□□ -1.87
BCD1YHR040W TRM5P38793 499 aa3.38□□□□□ -1.87
BCD1YHR040W POP2P39008 433 aa3.38□□□□□ -1.87
BCD1YHR040W FMP10P40098 244 aa3.38□□□□□ -1.87
BCD1YHR040W RGI2P40188 164 aa3.38□□□□□ -1.87
BCD1YHR040W ELO3P40319 345 aa3.38□□□□□ -1.87
BCD1YHR040W ATM1P40416 690 aa3.38□□□□□ -1.87
BCD1YHR040W PFA3P42836 336 aa3.38□□□□□ -1.87
BCD1YHR040W BUD13P46947 266 aaPredicted RBP3.38□□□□□ -1.87
BCD1YHR040W ASG7P46993 209 aa3.38□□□□□ -1.87
BCD1YHR040W PET130P47065 347 aa3.38□□□□□ -1.87
BCD1YHR040W PRP24P49960 444 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W OCA1P50946 238 aaPredicted RBP3.38□□□□□ -1.87
BCD1YHR040W YGL108CP53139 140 aa3.38□□□□□ -1.87
BCD1YHR040W EFM5P53200 248 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W COG2P53271 262 aa3.38□□□□□ -1.87
BCD1YHR040W GTR2P53290 341 aa3.38□□□□□ -1.87
BCD1YHR040W BUD32P53323 261 aa3.38□□□□□ -1.87
BCD1YHR040W DSL1P53847 754 aa3.38□□□□□ -1.87
BCD1YHR040W ASI2P53895 289 aa3.38□□□□□ -1.87
BCD1YHR040W YNL010WP53981 241 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W LSM3P57743 89 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W ARG5,6Q01217 863 aa3.38□□□□□ -1.87
BCD1YHR040W SPP2Q02521 185 aa3.38□□□□□ -1.87
BCD1YHR040W TRS31Q03337 283 aa3.38□□□□□ -1.87
BCD1YHR040W RPN9Q04062 393 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W VBA4Q04602 768 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W ARP9Q05123 467 aa3.38□□□□□ -1.87
BCD1YHR040W ASM4Q05166 528 aa3.38□□□□□ -1.87
BCD1YHR040W SWC7Q06707 132 aa3.38□□□□□ -1.87
BCD1YHR040W VAM6Q07468 1049 aa3.38□□□□□ -1.87
BCD1YHR040W SGO1Q08490 590 aa3.38□□□□□ -1.87
BCD1YHR040W MUM3Q08750 479 aa3.38□□□□□ -1.87
BCD1YHR040W TGL5Q12043 749 aa3.38□□□□□ -1.87
BCD1YHR040W CHS5Q12114 671 aaKnown RBP3.38□□□□□ -1.87
BCD1YHR040W MDY2Q12285 212 aa3.38□□□□□ -1.87
BCD1YHR040W SWM1Q12379 170 aa3.38□□□□□ -1.87
BCD1YHR040W TPK2P06245 380 aa3.37□□□□□ -1.87
BCD1YHR040W SUI3P09064 285 aaKnown RBP3.37□□□□□ -1.87
BCD1YHR040W TY2A-LR1P0C2J4 438 aa3.37□□□□□ -1.87
BCD1YHR040W TY2A-FP0CX61 438 aa3.37□□□□□ -1.87
BCD1YHR040W TY2A-GR2P0CX62 438 aa3.37□□□□□ -1.87
BCD1YHR040W MAS1P10507 462 aa3.37□□□□□ -1.87
BCD1YHR040W SEC63P14906 663 aa3.37□□□□□ -1.87
BCD1YHR040W MTF1P14908 341 aaKnown RBP3.37□□□□□ -1.87
BCD1YHR040W TY2A-CP25383 438 aa3.37□□□□□ -1.87
BCD1YHR040W POT1P27796 417 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
BCD1YHR040W PEX2P32800 271 aa3.37□□□□□ -1.87
BCD1YHR040W ASK1P35734 292 aa3.37□□□□□ -1.87
BCD1YHR040W APT2P36973 181 aa3.37□□□□□ -1.87
BCD1YHR040W YBL029WP38201 376 aa3.37□□□□□ -1.87
BCD1YHR040W SLX1P38324 304 aa3.37□□□□□ -1.87
BCD1YHR040W YHI9P38765 294 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms