RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C ECT1P33412 323 aa3.05□□□□□ -1.92
RPN1YHR027C SRP102P36057 244 aaPredicted RBP3.05□□□□□ -1.92
RPN1YHR027C RRN3P36070 627 aa3.05□□□□□ -1.92
RPN1YHR027C SHM2P37291 469 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C YBR013CP38215 129 aa3.05□□□□□ -1.92
RPN1YHR027C MMS4P38257 691 aa3.05□□□□□ -1.92
RPN1YHR027C ARN2P38724 620 aa3.05□□□□□ -1.92
RPN1YHR027C SPL2P38839 148 aa3.05□□□□□ -1.92
RPN1YHR027C VAB2P40003 282 aa3.05□□□□□ -1.92
RPN1YHR027C YEN1P40028 759 aa3.05□□□□□ -1.92
RPN1YHR027C RGI1P40043 161 aaPredicted RBP3.05□□□□□ -1.92
RPN1YHR027C YMR147WP40218 223 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C YIL166CP40445 542 aa3.05□□□□□ -1.92
RPN1YHR027C YIL024CP40543 189 aa3.05□□□□□ -1.92
RPN1YHR027C RPS12P48589 143 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C YBP2P53169 641 aa3.05□□□□□ -1.92
RPN1YHR027C PEX8P53248 589 aa3.05□□□□□ -1.92
RPN1YHR027C LSB1P53281 241 aa3.05□□□□□ -1.92
RPN1YHR027C YNR068CP53754 272 aa3.05□□□□□ -1.92
RPN1YHR027C HDA1P53973 706 aa3.05□□□□□ -1.92
RPN1YHR027C NAM8Q00539 523 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C YDR090CQ03193 310 aa3.05□□□□□ -1.92
RPN1YHR027C PML39Q03760 334 aa3.05□□□□□ -1.92
RPN1YHR027C GAD1Q04792 585 aa3.05□□□□□ -1.92
RPN1YHR027C YLR283WQ05867 314 aa3.05□□□□□ -1.92
RPN1YHR027C BOP2Q06150 570 aa3.05□□□□□ -1.92
RPN1YHR027C PHO92Q06390 306 aa3.05□□□□□ -1.92
RPN1YHR027C CYK3Q07533 885 aa3.05□□□□□ -1.92
RPN1YHR027C ZEO1Q08245 113 aa3.05□□□□□ -1.92
RPN1YHR027C YPL199CQ08954 240 aa3.05□□□□□ -1.92
RPN1YHR027C TRX2P22803 104 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C SAT4P25333 603 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C ADP1P25371 1049 aa3.05□□□□□ -1.92
RPN1YHR027C POF1P25576 258 aa3.05□□□□□ -1.92
RPN1YHR027C CDC20P26309 610 aa3.05□□□□□ -1.92
RPN1YHR027C BEM1P29366 551 aa3.05□□□□□ -1.92
RPN1YHR027C FAA1P30624 700 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C MRPL9P31334 269 aa3.05□□□□□ -1.92
RPN1YHR027C PRO3P32263 286 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C ISC10P32645 267 aa3.05□□□□□ -1.92
RPN1YHR027C MGM101P32787 269 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C SUR1P33300 382 aa3.05□□□□□ -1.92
RPN1YHR027C TFA2P36145 328 aa3.05□□□□□ -1.92
RPN1YHR027C YBR241CP38142 488 aa3.05□□□□□ -1.92
RPN1YHR027C YBR259WP38338 688 aa3.05□□□□□ -1.92
RPN1YHR027C COS8P38723 381 aa3.05□□□□□ -1.92
RPN1YHR027C PAN5P38787 379 aa3.05□□□□□ -1.92
RPN1YHR027C IPT1P38954 527 aa3.05□□□□□ -1.92
RPN1YHR027C MMF1P40185 145 aaKnown RBP3.05□□□□□ -1.92
RPN1YHR027C YIL054WP40524 105 aa3.05□□□□□ -1.92
RPN1YHR027C PFA3P42836 336 aa3.05□□□□□ -1.92
RPN1YHR027C SLS1P42900 643 aa3.05□□□□□ -1.92
RPN1YHR027C PMT4P46971 762 aa3.05□□□□□ -1.92
RPN1YHR027C AIM23P47015 356 aa3.05□□□□□ -1.92
RPN1YHR027C MTQ1P53944 314 aa3.05□□□□□ -1.92
RPN1YHR027C ATG16Q03818 150 aa3.05□□□□□ -1.92
RPN1YHR027C BCH1Q05029 724 aa3.05□□□□□ -1.92
RPN1YHR027C ECM38Q05902 660 aaPredicted RBP3.05□□□□□ -1.92
RPN1YHR027C ECM7Q06200 448 aa3.05□□□□□ -1.92
RPN1YHR027C TFC6Q06339 672 aa3.05□□□□□ -1.92
RPN1YHR027C RFU1Q08003 200 aa3.05□□□□□ -1.92
RPN1YHR027C YOL019WQ08157 551 aa3.05□□□□□ -1.92
RPN1YHR027C PPM2Q08282 695 aa3.05□□□□□ -1.92
RPN1YHR027C YOR238WQ08634 303 aa3.05□□□□□ -1.92
RPN1YHR027C GUP2Q08929 609 aa3.05□□□□□ -1.92
RPN1YHR027C ATX2Q12067 313 aa3.05□□□□□ -1.92
RPN1YHR027C AI4P03878 556 aa3.04□□□□□ -1.92
RPN1YHR027C ATP4P05626 244 aa3.04□□□□□ -1.92
RPN1YHR027C IMA3P0CW40 589 aa3.04□□□□□ -1.92
RPN1YHR027C IMA4P0CW41 589 aa3.04□□□□□ -1.92
RPN1YHR027C MTF1P14908 341 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C RPL24BP24000 155 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C CPR4P25334 318 aa3.04□□□□□ -1.92
RPN1YHR027C MTC2P34246 357 aa3.04□□□□□ -1.92
RPN1YHR027C DHH1P39517 506 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C AAD14P42884 376 aa3.04□□□□□ -1.92
RPN1YHR027C TOS3P43637 560 aa3.04□□□□□ -1.92
RPN1YHR027C DLD2P46681 530 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C PTK2P47116 818 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C LYS20P48570 428 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C CWC27Q02770 301 aa3.04□□□□□ -1.92
RPN1YHR027C YPL108WQ02872 168 aaPredicted RBP3.04□□□□□ -1.92
RPN1YHR027C YMR265CQ03508 461 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C EFR3Q03653 782 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C DPB4Q04603 196 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C ESC8Q08119 714 aa3.04□□□□□ -1.92
RPN1YHR027C IMA2Q08295 589 aa3.04□□□□□ -1.92
RPN1YHR027C FAL1Q12099 399 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C AGC1Q12482 902 aa3.04□□□□□ -1.92
RPN1YHR027C CDC28P00546 298 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C HTB1P02293 131 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C HTB2P02294 131 aa3.04□□□□□ -1.92
RPN1YHR027C MSS18P08593 268 aa3.04□□□□□ -1.92
RPN1YHR027C YPK1P12688 680 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C COX11P19516 300 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C MRP4P32902 394 aa3.04□□□□□ -1.92
RPN1YHR027C YKR051WP36142 418 aa3.04□□□□□ -1.92
RPN1YHR027C FUI1P38196 639 aa3.04□□□□□ -1.92
RPN1YHR027C SLI15P38283 698 aa3.04□□□□□ -1.92
RPN1YHR027C UBA4P38820 440 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms