RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W STE7P06784 515 aa4.6□□□□□ -1.67
VPS29YHR012W SPT3P06844 337 aa4.6□□□□□ -1.67
VPS29YHR012W NMT1P14743 455 aa4.6□□□□□ -1.67
VPS29YHR012W GRR1P24814 1151 aa4.6□□□□□ -1.67
VPS29YHR012W PHO87P25360 923 aa4.6□□□□□ -1.67
VPS29YHR012W TRX3P25372 127 aa4.6□□□□□ -1.67
VPS29YHR012W FUN30P31380 1131 aa4.6□□□□□ -1.67
VPS29YHR012W NFU1P32860 256 aa4.6□□□□□ -1.67
VPS29YHR012W RPS1AP33442 255 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W PTH2P34222 208 aa4.6□□□□□ -1.67
VPS29YHR012W SOH1P38633 127 aa4.6□□□□□ -1.67
VPS29YHR012W GPI16P38875 610 aa4.6□□□□□ -1.67
VPS29YHR012W YJL206CP39529 758 aa4.6□□□□□ -1.67
VPS29YHR012W YHB1P39676 399 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W PEP8P40335 379 aa4.6□□□□□ -1.67
VPS29YHR012W ICE2P40499 491 aa4.6□□□□□ -1.67
VPS29YHR012W PRM2P40534 656 aa4.6□□□□□ -1.67
VPS29YHR012W YIL001WP40560 513 aa4.6□□□□□ -1.67
VPS29YHR012W AXL1P40851 1208 aa4.6□□□□□ -1.67
VPS29YHR012W AZF1P41696 914 aa4.6□□□□□ -1.67
VPS29YHR012W RPL10P41805 221 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W ZIP2P53061 704 aa4.6□□□□□ -1.67
VPS29YHR012W ROG1P53118 685 aa4.6□□□□□ -1.67
VPS29YHR012W YNL140CP53910 189 aa4.6□□□□□ -1.67
VPS29YHR012W YNL092WP53934 400 aa4.6□□□□□ -1.67
VPS29YHR012W MPS1P54199 764 aa4.6□□□□□ -1.67
VPS29YHR012W LSM3P57743 89 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W RMI1Q02685 241 aa4.6□□□□□ -1.67
VPS29YHR012W VPS16Q03308 798 aa4.6□□□□□ -1.67
VPS29YHR012W REX4Q08237 289 aa4.6□□□□□ -1.67
VPS29YHR012W NOB1Q08444 459 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W PUS7Q08647 676 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W YLL054CQ12244 843 aa4.6□□□□□ -1.67
VPS29YHR012W RRP36Q12481 300 aaPredicted RBP4.6□□□□□ -1.67
VPS29YHR012W PAR32Q12515 295 aaKnown RBP4.6□□□□□ -1.67
VPS29YHR012W SGV1P23293 657 aaKnown RBP4.59□□□□□ -1.67
VPS29YHR012W AAD3P25612 363 aa4.59□□□□□ -1.67
VPS29YHR012W RMA1P36001 430 aaKnown RBP4.59□□□□□ -1.67
VPS29YHR012W OAF1P39720 1047 aaPredicted RBP4.59□□□□□ -1.67
VPS29YHR012W YIL152WP40455 235 aa4.59□□□□□ -1.67
VPS29YHR012W STB2P46679 850 aa4.59□□□□□ -1.67
VPS29YHR012W BNA3P47039 444 aaKnown RBP4.59□□□□□ -1.67
VPS29YHR012W MPS3P47069 682 aa4.59□□□□□ -1.67
VPS29YHR012W YJR039WP47107 1121 aa4.59□□□□□ -1.67
VPS29YHR012W BIO3P50277 480 aa4.59□□□□□ -1.67
VPS29YHR012W ROM1P53046 1155 aa4.59□□□□□ -1.67
VPS29YHR012W RCF2P53721 224 aa4.59□□□□□ -1.67
VPS29YHR012W FDC1Q03034 503 aa4.59□□□□□ -1.67
VPS29YHR012W USA1Q03714 838 aa4.59□□□□□ -1.67
VPS29YHR012W YMR155WQ03795 547 aa4.59□□□□□ -1.67
VPS29YHR012W BUD22Q04347 519 aaKnown RBP4.59□□□□□ -1.67
VPS29YHR012W YDL121CQ07541 149 aa4.59□□□□□ -1.67
VPS29YHR012W RRP40Q08285 240 aaKnown RBP4.59□□□□□ -1.67
VPS29YHR012W MLH3Q12083 715 aa4.59□□□□□ -1.67
VPS29YHR012W GET4Q12125 312 aa4.59□□□□□ -1.67
VPS29YHR012W YPL245WQ12179 454 aaKnown RBP4.59□□□□□ -1.67
VPS29YHR012W RUP1Q12242 671 aa4.59□□□□□ -1.67
VPS29YHR012W TY2A-LR1P0C2J4 438 aa4.58□□□□□ -1.68
VPS29YHR012W SSC1P0CS90 654 aaKnown RBP4.58□□□□□ -1.68
VPS29YHR012W TY2A-FP0CX61 438 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-GR2P0CX62 438 aa4.58□□□□□ -1.68
VPS29YHR012W CBS2P14905 389 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-CP25383 438 aa4.58□□□□□ -1.68
VPS29YHR012W LTV1P34078 463 aa4.58□□□□□ -1.68
VPS29YHR012W SET3P36124 751 aa4.58□□□□□ -1.68
VPS29YHR012W YBR139WP38109 508 aa4.58□□□□□ -1.68
VPS29YHR012W PHB1P40961 287 aa4.58□□□□□ -1.68
VPS29YHR012W GCD10P41814 478 aa4.58□□□□□ -1.68
VPS29YHR012W SPT20P50875 604 aa4.58□□□□□ -1.68
VPS29YHR012W IRC15Q02733 499 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-DR2Q03483 438 aa4.58□□□□□ -1.68
VPS29YHR012W YMR209CQ03648 457 aa4.58□□□□□ -1.68
VPS29YHR012W YMR210WQ03649 449 aa4.58□□□□□ -1.68
VPS29YHR012W APC4Q04601 652 aa4.58□□□□□ -1.68
VPS29YHR012W BSC2Q05611 235 aa4.58□□□□□ -1.68
VPS29YHR012W ESA1Q08649 445 aa4.58□□□□□ -1.68
VPS29YHR012W SLP1Q12232 587 aa4.58□□□□□ -1.68
VPS29YHR012W YDL177CQ12257 170 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-BQ12260 438 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-OR2Q12293 438 aa4.58□□□□□ -1.68
VPS29YHR012W NTO1Q12311 748 aa4.58□□□□□ -1.68
VPS29YHR012W YVC1Q12324 675 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-DR1Q12392 438 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-OR1Q12439 438 aa4.58□□□□□ -1.68
VPS29YHR012W YPL247CQ12523 523 aa4.58□□□□□ -1.68
VPS29YHR012W MHT1Q12525 324 aa4.58□□□□□ -1.68
VPS29YHR012W YCL012CQ8J0M4 134 aa4.58□□□□□ -1.68
VPS29YHR012W TY2A-DR3Q99303 438 aa4.58□□□□□ -1.68
VPS29YHR012W GLT1Q12680 2145 aaKnown RBP4.58□□□□□ -1.68
VPS29YHR012W LEU4P06208 619 aaKnown RBP4.57□□□□□ -1.68
VPS29YHR012W NPR1P22211 790 aa4.57□□□□□ -1.68
VPS29YHR012W APN1P22936 367 aa4.57□□□□□ -1.68
VPS29YHR012W MXR2P25566 168 aa4.57□□□□□ -1.68
VPS29YHR012W HEM3P28789 327 aa4.57□□□□□ -1.68
VPS29YHR012W MIA40P36046 403 aa4.57□□□□□ -1.68
VPS29YHR012W YCR087C-AP37263 153 aa4.57□□□□□ -1.68
VPS29YHR012W CBP4P37267 147 aa4.57□□□□□ -1.68
VPS29YHR012W COA1P40452 197 aa4.57□□□□□ -1.68
VPS29YHR012W PRM10P42946 383 aa4.57□□□□□ -1.68
VPS29YHR012W IRC6P43615 237 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms