RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W PRO1P32264 428 aa6.47□□□□□ -1.37
NUP49YGL172W AAR2P32357 355 aaPredicted RBP6.47□□□□□ -1.37
NUP49YGL172W CDC5P32562 705 aa6.47□□□□□ -1.37
NUP49YGL172W PET127P32606 800 aa6.47□□□□□ -1.37
NUP49YGL172W RPT5P33297 434 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W HES1P35843 434 aa6.47□□□□□ -1.37
NUP49YGL172W FRE2P36033 711 aa6.47□□□□□ -1.37
NUP49YGL172W COS111P38308 924 aa6.47□□□□□ -1.37
NUP49YGL172W TSC10P38342 320 aa6.47□□□□□ -1.37
NUP49YGL172W BEM4P39011 633 aa6.47□□□□□ -1.37
NUP49YGL172W ALK1P43633 760 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W GUS1P46655 708 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
NUP49YGL172W AIM22P47051 409 aa6.47□□□□□ -1.37
NUP49YGL172W MPS3P47069 682 aa6.47□□□□□ -1.37
NUP49YGL172W MTR3P48240 250 aaPredicted RBP6.47□□□□□ -1.37
NUP49YGL172W BIO3P50277 480 aa6.47□□□□□ -1.37
NUP49YGL172W IMA1P53051 589 aa6.47□□□□□ -1.37
NUP49YGL172W SDT1P53078 280 aa6.47□□□□□ -1.37
NUP49YGL172W TYW3P53177 273 aa6.47□□□□□ -1.37
NUP49YGL172W NNF2P53253 936 aa6.47□□□□□ -1.37
NUP49YGL172W COG2P53271 262 aa6.47□□□□□ -1.37
NUP49YGL172W ARC35P53731 342 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W YAT1P80235 687 aa6.47□□□□□ -1.37
NUP49YGL172W NAM8Q00539 523 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W GTR1Q00582 310 aa6.47□□□□□ -1.37
NUP49YGL172W YMR102CQ03177 834 aa6.47□□□□□ -1.37
NUP49YGL172W MUS81Q04149 632 aaPredicted RBP6.47□□□□□ -1.37
NUP49YGL172W GTB1Q04924 702 aa6.47□□□□□ -1.37
NUP49YGL172W RRP40Q08285 240 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W WTM2Q12206 467 aa6.47□□□□□ -1.37
NUP49YGL172W RUP1Q12242 671 aa6.47□□□□□ -1.37
NUP49YGL172W RPN5Q12250 445 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W YVC1Q12324 675 aa6.47□□□□□ -1.37
NUP49YGL172W JLP1Q12358 412 aa6.47□□□□□ -1.37
NUP49YGL172W ACC1Q00955 2233 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W RAS2P01120 322 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W ATP4P05626 244 aa6.46□□□□□ -1.38
NUP49YGL172W CCA1P21269 546 aa6.46□□□□□ -1.38
NUP49YGL172W PHO91P27514 894 aa6.46□□□□□ -1.38
NUP49YGL172W THI4P32318 326 aa6.46□□□□□ -1.38
NUP49YGL172W SSE1P32589 693 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W DUT1P33317 147 aa6.46□□□□□ -1.38
NUP49YGL172W TRM5P38793 499 aa6.46□□□□□ -1.38
NUP49YGL172W AYR1P40471 297 aa6.46□□□□□ -1.38
NUP49YGL172W SEC26P41810 973 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W IRC15Q02733 499 aa6.46□□□□□ -1.38
NUP49YGL172W SPC24Q04477 213 aa6.46□□□□□ -1.38
NUP49YGL172W YHC1Q05900 231 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W DIC1Q06143 298 aa6.46□□□□□ -1.38
NUP49YGL172W YPQ2Q06328 317 aa6.46□□□□□ -1.38
NUP49YGL172W YLR413WQ06689 675 aa6.46□□□□□ -1.38
NUP49YGL172W REX4Q08237 289 aa6.46□□□□□ -1.38
NUP49YGL172W BSC6Q08280 497 aa6.46□□□□□ -1.38
NUP49YGL172W LEU9Q12166 604 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W NTO1Q12311 748 aa6.46□□□□□ -1.38
NUP49YGL172W PNO1Q99216 274 aaKnown RBP6.46□□□□□ -1.38
NUP49YGL172W Q0010Q9ZZX9 128 aa6.46□□□□□ -1.38
NUP49YGL172W RPP2BP02400 110 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W ARG81P05085 880 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-LR1P0C2J4 438 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-FP0CX61 438 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-GR2P0CX62 438 aa6.45□□□□□ -1.38
NUP49YGL172W RNA1P11745 407 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W PHO81P17442 1178 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-CP25383 438 aa6.45□□□□□ -1.38
NUP49YGL172W SPO23P33757 523 aa6.45□□□□□ -1.38
NUP49YGL172W ASC1P38011 319 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W YBR238CP38330 731 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W RSP5P39940 809 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W NTA1P40354 457 aa6.45□□□□□ -1.38
NUP49YGL172W HPM1P40481 377 aa6.45□□□□□ -1.38
NUP49YGL172W RLP7P40693 322 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W PAC11P40960 533 aa6.45□□□□□ -1.38
NUP49YGL172W YGR250CP53316 781 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W YDR476CQ03362 224 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-DR2Q03483 438 aa6.45□□□□□ -1.38
NUP49YGL172W EFR3Q03653 782 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W YMR010WQ03687 405 aa6.45□□□□□ -1.38
NUP49YGL172W SIZ1Q04195 904 aa6.45□□□□□ -1.38
NUP49YGL172W SWF1Q04629 336 aa6.45□□□□□ -1.38
NUP49YGL172W RRN11Q04712 507 aa6.45□□□□□ -1.38
NUP49YGL172W YDR338CQ05497 695 aa6.45□□□□□ -1.38
NUP49YGL172W PDR8Q06149 701 aa6.45□□□□□ -1.38
NUP49YGL172W OSW1Q08692 278 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-BQ12260 438 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-OR2Q12293 438 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-DR1Q12392 438 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-OR1Q12439 438 aa6.45□□□□□ -1.38
NUP49YGL172W YKL018C-AQ3E7A7 99 aa6.45□□□□□ -1.38
NUP49YGL172W TY2A-DR3Q99303 438 aa6.45□□□□□ -1.38
NUP49YGL172W SEN1Q00416 2231 aaKnown RBP6.45□□□□□ -1.38
NUP49YGL172W GAL4P04386 881 aa6.44□□□□□ -1.38
NUP49YGL172W PWP1P21304 576 aaKnown RBP6.44□□□□□ -1.38
NUP49YGL172W MSB1P21339 1137 aaKnown RBP6.44□□□□□ -1.38
NUP49YGL172W ZIP1P31111 875 aa6.44□□□□□ -1.38
NUP49YGL172W NTH1P32356 751 aa6.44□□□□□ -1.38
NUP49YGL172W ERG1P32476 496 aaKnown RBP6.44□□□□□ -1.38
NUP49YGL172W MRPL17P36528 281 aa6.44□□□□□ -1.38
NUP49YGL172W YHR112CP38716 378 aa6.44□□□□□ -1.38
NUP49YGL172W MNL1P38888 796 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms