RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	PTR3	P43606	678 aa		3.92	□□□□□ -1.78
SLX8	YER116C	MPS3	P47069	682 aa		3.92	□□□□□ -1.78
SLX8	YER116C	AMA1	P50082	593 aa		3.92	□□□□□ -1.78
SLX8	YER116C	MTL1	P53214	551 aa		3.92	□□□□□ -1.78
SLX8	YER116C	YGR127W	P53275	312 aa		3.92	□□□□□ -1.78
SLX8	YER116C	FHN1	P53279	174 aa		3.92	□□□□□ -1.78
SLX8	YER116C	ORC3	P54790	616 aa		3.92	□□□□□ -1.78
SLX8	YER116C	NRG1	Q03125	231 aa		3.92	□□□□□ -1.78
SLX8	YER116C	ENT5	Q03769	411 aa	Known RBP	3.92	□□□□□ -1.78
SLX8	YER116C	SSY1	Q03770	852 aa		3.92	□□□□□ -1.78
SLX8	YER116C	GIM5	Q04493	163 aa		3.92	□□□□□ -1.78
SLX8	YER116C	COQ9	Q05779	260 aa		3.92	□□□□□ -1.78
SLX8	YER116C	PDR8	Q06149	701 aa		3.92	□□□□□ -1.78
SLX8	YER116C	GEP3	Q08622	556 aa		3.92	□□□□□ -1.78
SLX8	YER116C	RDR1	Q08904	546 aa		3.92	□□□□□ -1.78
SLX8	YER116C	ATG31	Q12421	196 aa		3.92	□□□□□ -1.78
SLX8	YER116C	RAD9	P14737	1309 aa		3.92	□□□□□ -1.78
SLX8	YER116C	TDH2	P00358	332 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
SLX8	YER116C	COX1	P00401	534 aa		3.91	□□□□□ -1.78
SLX8	YER116C	AAC1	P04710	309 aa		3.91	□□□□□ -1.78
SLX8	YER116C	PMA1	P05030	918 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	MSF1	P08425	469 aa		3.91	□□□□□ -1.78
SLX8	YER116C	MAS1	P10507	462 aa		3.91	□□□□□ -1.78
SLX8	YER116C	NHP6B	P11633	99 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	THR4	P16120	514 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	YCP4	P25349	247 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	PTR2	P32901	601 aa		3.91	□□□□□ -1.78
SLX8	YER116C	RPC25	P35718	212 aa		3.91	□□□□□ -1.78
SLX8	YER116C	MRPL10	P36520	322 aa		3.91	□□□□□ -1.78
SLX8	YER116C	ICS2	P38284	255 aa		3.91	□□□□□ -1.78
SLX8	YER116C	SDH8	P38345	138 aa		3.91	□□□□□ -1.78
SLX8	YER116C	YMR262W	P38430	313 aa		3.91	□□□□□ -1.78
SLX8	YER116C	GPI16	P38875	610 aa		3.91	□□□□□ -1.78
SLX8	YER116C	PRP39	P39682	629 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	YER130C	P39959	443 aa		3.91	□□□□□ -1.78
SLX8	YER116C	VPS73	P53142	486 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	LIF1	P53150	421 aa		3.91	□□□□□ -1.78
SLX8	YER116C	YGR067C	P53243	804 aa		3.91	□□□□□ -1.78
SLX8	YER116C	PLB2	Q03674	706 aa		3.91	□□□□□ -1.78
SLX8	YER116C	CTK1	Q03957	528 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	SIZ1	Q04195	904 aa		3.91	□□□□□ -1.78
SLX8	YER116C	YDR109C	Q04585	715 aa		3.91	□□□□□ -1.78
SLX8	YER116C	RTT103	Q05543	409 aa		3.91	□□□□□ -1.78
SLX8	YER116C	RGC1	Q06108	1083 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	PEX27	Q08580	376 aa		3.91	□□□□□ -1.78
SLX8	YER116C	YOR029W	Q12243	111 aa		3.91	□□□□□ -1.78
SLX8	YER116C	INP53	Q12271	1107 aa		3.91	□□□□□ -1.78
SLX8	YER116C	PAA1	Q12447	191 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	ZPS1	Q12512	249 aa		3.91	□□□□□ -1.78
SLX8	YER116C	RRP12	Q12754	1228 aa	Known RBP	3.91	□□□□□ -1.78
SLX8	YER116C	AI5_ALPHA	Q9ZZX1	630 aa		3.91	□□□□□ -1.78
SLX8	YER116C	COX3	P00420	269 aa		3.9	□□□□□ -1.79
SLX8	YER116C	GAL4	P04386	881 aa		3.9	□□□□□ -1.79
SLX8	YER116C	KRS1	P15180	591 aa	Known RBP	3.9	□□□□□ -1.79
SLX8	YER116C	POL30	P15873	258 aa	Known RBP	3.9	□□□□□ -1.79
SLX8	YER116C	RNQ1	P25367	405 aa		3.9	□□□□□ -1.79
SLX8	YER116C	PTC6	P25646	442 aa		3.9	□□□□□ -1.79
SLX8	YER116C	CSM1	P25651	190 aa		3.9	□□□□□ -1.79
SLX8	YER116C	CDC20	P26309	610 aa		3.9	□□□□□ -1.79
SLX8	YER116C	GAC1	P28006	793 aa		3.9	□□□□□ -1.79
SLX8	YER116C	PPA2	P28239	310 aa		3.9	□□□□□ -1.79
SLX8	YER116C	DEG1	P31115	442 aa	Known RBP	3.9	□□□□□ -1.79
SLX8	YER116C	BCS1	P32839	456 aa		3.9	□□□□□ -1.79
SLX8	YER116C	SKG6	P32900	734 aa	Predicted RBP	3.9	□□□□□ -1.79
SLX8	YER116C	RIX1	P38883	763 aa	Predicted RBP	3.9	□□□□□ -1.79
SLX8	YER116C	YHR210C	P38893	341 aa		3.9	□□□□□ -1.79
SLX8	YER116C	ELO1	P39540	310 aa		3.9	□□□□□ -1.79
SLX8	YER116C	RFC4	P40339	323 aa	Known RBP	3.9	□□□□□ -1.79
SLX8	YER116C	TAX4	P47030	604 aa		3.9	□□□□□ -1.79
SLX8	YER116C	YGL108C	P53139	140 aa		3.9	□□□□□ -1.79
SLX8	YER116C	SPC98	P53540	846 aa		3.9	□□□□□ -1.79
SLX8	YER116C	ADE16	P54113	591 aa	Known RBP	3.9	□□□□□ -1.79
SLX8	YER116C	PIG1	Q06216	648 aa		3.9	□□□□□ -1.79
SLX8	YER116C	MRI1	Q06489	411 aa	Known RBP	3.9	□□□□□ -1.79
SLX8	YER116C	SNA4	Q07549	140 aa		3.9	□□□□□ -1.79
SLX8	YER116C	TLG2	Q08144	397 aa		3.9	□□□□□ -1.79
SLX8	YER116C	BAG7	Q12128	409 aa		3.9	□□□□□ -1.79
SLX8	YER116C	GPH1	P06738	902 aa	Known RBP	3.89	□□□□□ -1.79
SLX8	YER116C	RAD3	P06839	778 aa		3.89	□□□□□ -1.79
SLX8	YER116C	NFT1	P0CE68	1218 aa		3.89	□□□□□ -1.79
SLX8	YER116C	RPL18A	P0CX49	186 aa	Known RBP	3.89	□□□□□ -1.79
SLX8	YER116C	RPL18B	P0CX50	186 aa	Known RBP	3.89	□□□□□ -1.79
SLX8	YER116C	MATALPHA2	P0CY08	210 aa		3.89	□□□□□ -1.79
SLX8	YER116C	HMLALPHA2	P0CY09	210 aa		3.89	□□□□□ -1.79
SLX8	YER116C	YAK1	P14680	807 aa		3.89	□□□□□ -1.79
SLX8	YER116C	GPI12	P23797	304 aa		3.89	□□□□□ -1.79
SLX8	YER116C	PBN1	P25580	416 aa		3.89	□□□□□ -1.79
SLX8	YER116C	CIN8	P27895	1000 aa		3.89	□□□□□ -1.79
SLX8	YER116C	MSS51	P32335	436 aa		3.89	□□□□□ -1.79
SLX8	YER116C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
SLX8	YER116C	YSC83	P32792	385 aa		3.89	□□□□□ -1.79
SLX8	YER116C	SOF1	P33750	489 aa	Known RBP	3.89	□□□□□ -1.79
SLX8	YER116C	MIA40	P36046	403 aa		3.89	□□□□□ -1.79
SLX8	YER116C	MRPL7	P36519	292 aa		3.89	□□□□□ -1.79
SLX8	YER116C	AAP1	P37898	856 aa	Known RBP	3.89	□□□□□ -1.79
SLX8	YER116C	DUG2	P38149	878 aa		3.89	□□□□□ -1.79
SLX8	YER116C	OLA1	P38219	394 aa	Known RBP	3.89	□□□□□ -1.79
SLX8	YER116C	RTC2	P38279	296 aa		3.89	□□□□□ -1.79
SLX8	YER116C	VHC1	P38329	1120 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms