RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C RPS17AP02407 136 aaKnown RBP7.48□□□□□ -1.21
PUP3YER094C MST1P07236 462 aa7.48□□□□□ -1.21
PUP3YER094C RAP1P11938 827 aa7.48□□□□□ -1.21
PUP3YER094C RPS17BP14127 136 aaKnown RBP7.48□□□□□ -1.21
PUP3YER094C BUB3P26449 341 aa7.48□□□□□ -1.21
PUP3YER094C TOR2P32600 2474 aaKnown RBP7.48□□□□□ -1.21
PUP3YER094C CAT2P32796 670 aaKnown RBP7.48□□□□□ -1.21
PUP3YER094C UGP1P32861 499 aaKnown RBP7.48□□□□□ -1.21
PUP3YER094C AST1P35183 429 aa7.48□□□□□ -1.21
PUP3YER094C YHR218WP38899 603 aa7.48□□□□□ -1.21
PUP3YER094C MTW1P39731 289 aa7.48□□□□□ -1.21
PUP3YER094C LRO1P40345 661 aa7.48□□□□□ -1.21
PUP3YER094C RTS3P53289 263 aa7.48□□□□□ -1.21
PUP3YER094C SUN4P53616 420 aa7.48□□□□□ -1.21
PUP3YER094C DSL1P53847 754 aa7.48□□□□□ -1.21
PUP3YER094C YNL095CP53932 642 aa7.48□□□□□ -1.21
PUP3YER094C YDL129WQ07555 291 aa7.48□□□□□ -1.21
PUP3YER094C REX4Q08237 289 aa7.48□□□□□ -1.21
PUP3YER094C YPR064WQ12492 139 aa7.48□□□□□ -1.21
PUP3YER094C POL2P21951 2222 aaKnown RBP7.48□□□□□ -1.21
PUP3YER094C CBP2P03874 630 aaPredicted RBP7.47□□□□□ -1.21
PUP3YER094C DAP2P18962 818 aa7.47□□□□□ -1.21
PUP3YER094C PTP1P25044 335 aa7.47□□□□□ -1.21
PUP3YER094C SLM5P25345 492 aaKnown RBP7.47□□□□□ -1.21
PUP3YER094C AGP1P25376 633 aa7.47□□□□□ -1.21
PUP3YER094C SPB1P25582 841 aaPredicted RBP7.47□□□□□ -1.21
PUP3YER094C BUD14P27637 709 aa7.47□□□□□ -1.21
PUP3YER094C CDC13P32797 924 aaKnown RBP7.47□□□□□ -1.21
PUP3YER094C SSO1P32867 290 aa7.47□□□□□ -1.21
PUP3YER094C ASC1P38011 319 aaKnown RBP7.47□□□□□ -1.21
PUP3YER094C EHT1P38295 451 aa7.47□□□□□ -1.21
PUP3YER094C LTP1P40347 161 aa7.47□□□□□ -1.21
PUP3YER094C YIL001WP40560 513 aa7.47□□□□□ -1.21
PUP3YER094C YPS6P40583 537 aa7.47□□□□□ -1.21
PUP3YER094C PRM10P42946 383 aa7.47□□□□□ -1.21
PUP3YER094C GUS1P46655 708 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
PUP3YER094C PMT4P46971 762 aa7.47□□□□□ -1.21
PUP3YER094C YJR142WP47173 342 aa7.47□□□□□ -1.21
PUP3YER094C TOM22P49334 152 aa7.47□□□□□ -1.21
PUP3YER094C SKI8Q02793 397 aaPredicted RBP7.47□□□□□ -1.21
PUP3YER094C PEX12Q04370 399 aa7.47□□□□□ -1.21
PUP3YER094C BOP2Q06150 570 aa7.47□□□□□ -1.21
PUP3YER094C RTK1Q12100 620 aaPredicted RBP7.47□□□□□ -1.21
PUP3YER094C PSY3Q12318 242 aa7.47□□□□□ -1.21
PUP3YER094C YDR262WQ12331 272 aa7.47□□□□□ -1.21
PUP3YER094C RRP12Q12754 1228 aaKnown RBP7.47□□□□□ -1.21
PUP3YER094C LAG2Q92325 660 aa7.47□□□□□ -1.21
PUP3YER094C YPR096CO13587 100 aa7.46□□□□□ -1.22
PUP3YER094C RAD7P06779 565 aa7.46□□□□□ -1.22
PUP3YER094C ALG7P07286 448 aa7.46□□□□□ -1.22
PUP3YER094C RPP1BP10622 106 aaKnown RBP7.46□□□□□ -1.22
PUP3YER094C TRM1P15565 570 aaKnown RBP7.46□□□□□ -1.22
PUP3YER094C YAP1P19880 650 aaKnown RBP7.46□□□□□ -1.22
PUP3YER094C CMK2P22517 447 aa7.46□□□□□ -1.22
PUP3YER094C CLB3P24870 427 aa7.46□□□□□ -1.22
PUP3YER094C NUP2P32499 720 aa7.46□□□□□ -1.22
PUP3YER094C SKN1P33336 771 aa7.46□□□□□ -1.22
PUP3YER094C SKG1P36169 355 aa7.46□□□□□ -1.22
PUP3YER094C YHR112CP38716 378 aa7.46□□□□□ -1.22
PUP3YER094C RIC1P40395 1056 aa7.46□□□□□ -1.22
PUP3YER094C PAC11P40960 533 aa7.46□□□□□ -1.22
PUP3YER094C YGR250CP53316 781 aaKnown RBP7.46□□□□□ -1.22
PUP3YER094C GPI11Q06636 219 aa7.46□□□□□ -1.22
PUP3YER094C YLR036CQ07986 203 aa7.46□□□□□ -1.22
PUP3YER094C YOL131WQ08270 108 aa7.46□□□□□ -1.22
PUP3YER094C DIN7Q12086 430 aa7.46□□□□□ -1.22
PUP3YER094C YPR022CQ12139 1133 aa7.46□□□□□ -1.22
PUP3YER094C BMT6Q12291 365 aa7.46□□□□□ -1.22
PUP3YER094C STE7P06784 515 aa7.45□□□□□ -1.22
PUP3YER094C CDC3P32457 520 aaKnown RBP7.45□□□□□ -1.22
PUP3YER094C FMP46P36141 133 aaKnown RBP7.45□□□□□ -1.22
PUP3YER094C YBR241CP38142 488 aa7.45□□□□□ -1.22
PUP3YER094C BNA4P38169 460 aa7.45□□□□□ -1.22
PUP3YER094C SLM4P38247 162 aa7.45□□□□□ -1.22
PUP3YER094C RCK1P38622 512 aa7.45□□□□□ -1.22
PUP3YER094C MNN9P39107 395 aaKnown RBP7.45□□□□□ -1.22
PUP3YER094C ERV46P39727 415 aa7.45□□□□□ -1.22
PUP3YER094C VRG4P40107 337 aa7.45□□□□□ -1.22
PUP3YER094C LAS21P40367 830 aa7.45□□□□□ -1.22
PUP3YER094C NEO1P40527 1151 aa7.45□□□□□ -1.22
PUP3YER094C ARF3P40994 183 aaRIP-Chip data7.45□□□□□ -1.22not detected
PUP3YER094C YJL043WP47053 257 aa7.45□□□□□ -1.22
PUP3YER094C RAD17P48581 401 aa7.45□□□□□ -1.22
PUP3YER094C ESF2P53743 316 aaKnown RBP7.45□□□□□ -1.22
PUP3YER094C YNR068CP53754 272 aa7.45□□□□□ -1.22
PUP3YER094C ASI2P53895 289 aa7.45□□□□□ -1.22
PUP3YER094C MSC1Q03104 513 aa7.45□□□□□ -1.22
PUP3YER094C YKU80Q04437 629 aa7.45□□□□□ -1.22
PUP3YER094C MFG1Q07684 458 aa7.45□□□□□ -1.22
PUP3YER094C TAF3Q12297 353 aa7.45□□□□□ -1.22
PUP3YER094C PFK27Q12471 397 aaPredicted RBP7.45□□□□□ -1.22
PUP3YER094C GAL7P08431 366 aa7.44□□□□□ -1.22
PUP3YER094C SNF5P18480 905 aa7.44□□□□□ -1.22
PUP3YER094C URA4P20051 364 aa7.44□□□□□ -1.22
PUP3YER094C RNQ1P25367 405 aa7.44□□□□□ -1.22
PUP3YER094C CWP1P28319 239 aa7.44□□□□□ -1.22
PUP3YER094C PRO1P32264 428 aa7.44□□□□□ -1.22
PUP3YER094C ARP2P32381 391 aaKnown RBP7.44□□□□□ -1.22
PUP3YER094C ERG1P32476 496 aaKnown RBP7.44□□□□□ -1.22
PUP3YER094C NRP1P32770 719 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
Retrieved 100 of 5,963 RNA–protein pairs in 91.9 ms