RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C UTP9P38882 575 aaKnown RBP2.3□□□□□ -2.04
SMB1YER029C SMF1P38925 575 aa2.3□□□□□ -2.04
SMB1YER029C YFL067WP43537 175 aa2.3□□□□□ -2.04
SMB1YER029C VTC2P43585 828 aa2.3□□□□□ -2.04
SMB1YER029C TIS11P47977 285 aa2.3□□□□□ -2.04
SMB1YER029C PCP1P53259 346 aa2.3□□□□□ -2.04
SMB1YER029C GOR1P53839 350 aa2.3□□□□□ -2.04
SMB1YER029C NCS2P53923 493 aaPredicted RBP2.3□□□□□ -2.04
SMB1YER029C RPA49Q01080 415 aaPredicted RBP2.3□□□□□ -2.04
SMB1YER029C RRG7Q08774 242 aaPredicted RBP2.3□□□□□ -2.04
SMB1YER029C FDH1Q08911 376 aa2.3□□□□□ -2.04
SMB1YER029C RTP1Q12751 981 aa2.3□□□□□ -2.04
SMB1YER029C SOD1P00445 154 aaKnown RBP2.29□□□□□ -2.04
SMB1YER029C MET17P06106 444 aa2.29□□□□□ -2.04
SMB1YER029C SPS4P09937 338 aa2.29□□□□□ -2.04
SMB1YER029C MRP7P12687 371 aa2.29□□□□□ -2.04
SMB1YER029C CKA1P15790 372 aa2.29□□□□□ -2.04
SMB1YER029C GEX1P25596 615 aa2.29□□□□□ -2.04
SMB1YER029C STB6P36085 766 aa2.29□□□□□ -2.04
SMB1YER029C RFC3P38629 340 aa2.29□□□□□ -2.04
SMB1YER029C MTC6P38849 526 aa2.29□□□□□ -2.04
SMB1YER029C PTH1P38876 190 aaKnown RBP2.29□□□□□ -2.04
SMB1YER029C PRM5P40476 318 aa2.29□□□□□ -2.04
SMB1YER029C SDT1P53078 280 aa2.29□□□□□ -2.04
SMB1YER029C RMD9P53140 646 aaKnown RBP2.29□□□□□ -2.04
SMB1YER029C YLR152CP54072 576 aa2.29□□□□□ -2.04
SMB1YER029C HXT11P54862 567 aa2.29□□□□□ -2.04
SMB1YER029C MDM30Q05930 598 aa2.29□□□□□ -2.04
SMB1YER029C TMC1Q08422 150 aaPredicted RBP2.29□□□□□ -2.04
SMB1YER029C YPR022CQ12139 1133 aa2.29□□□□□ -2.04
SMB1YER029C YLR108CQ12259 485 aa2.29□□□□□ -2.04
SMB1YER029C YOL159C-AQ3E769 90 aa2.29□□□□□ -2.04
SMB1YER029C GPH1P06738 902 aaKnown RBP2.28□□□□□ -2.04
SMB1YER029C RPS8AP0CX39 200 aaKnown RBP2.28□□□□□ -2.04
SMB1YER029C RPS8BP0CX40 200 aaKnown RBP2.28□□□□□ -2.04
SMB1YER029C IDH2P28241 369 aaKnown RBP2.28□□□□□ -2.04
SMB1YER029C ERG3P32353 365 aa2.28□□□□□ -2.04
SMB1YER029C SDH3P33421 198 aa2.28□□□□□ -2.04
SMB1YER029C PIM1P36775 1133 aa2.28□□□□□ -2.04
SMB1YER029C RRT2P38332 387 aa2.28□□□□□ -2.04
SMB1YER029C MSG5P38590 489 aa2.28□□□□□ -2.04
SMB1YER029C SAS2P40963 338 aa2.28□□□□□ -2.04
SMB1YER029C ARF3P40994 183 aaRIP-Chip data2.28□□□□□ -2.04 RIP-Chip
SMB1YER029C TAF11Q04226 346 aa2.28□□□□□ -2.04
SMB1YER029C HSP31Q04432 237 aa2.28□□□□□ -2.04
SMB1YER029C PKH2Q12236 1081 aaKnown RBP2.28□□□□□ -2.04
SMB1YER029C ILV5P06168 395 aaKnown RBP2.27□□□□□ -2.05
SMB1YER029C PPH22P23595 377 aa2.27□□□□□ -2.05
SMB1YER029C SPS22P25380 463 aa2.27□□□□□ -2.05
SMB1YER029C APE2P32454 952 aaKnown RBP2.27□□□□□ -2.05
SMB1YER029C REC114P32841 428 aa2.27□□□□□ -2.05
SMB1YER029C PAN6P40459 309 aa2.27□□□□□ -2.05
SMB1YER029C LAM5P43560 674 aa2.27□□□□□ -2.05
SMB1YER029C ECM27P47144 725 aa2.27□□□□□ -2.05
SMB1YER029C SSN8P47821 323 aa2.27□□□□□ -2.05
SMB1YER029C YGL039WP53183 348 aaKnown RBP2.27□□□□□ -2.05
SMB1YER029C MTM1P53320 366 aa2.27□□□□□ -2.05
SMB1YER029C YNR048WP53740 393 aa2.27□□□□□ -2.05
SMB1YER029C YDR387CQ04162 555 aa2.27□□□□□ -2.05
SMB1YER029C HRI1Q05905 244 aaKnown RBP2.27□□□□□ -2.05
SMB1YER029C SIL1Q08199 421 aa2.27□□□□□ -2.05
SMB1YER029C RTN2Q12443 393 aa2.27□□□□□ -2.05
SMB1YER029C RMD5Q12508 421 aa2.27□□□□□ -2.05
SMB1YER029C HIS4P00815 799 aaKnown RBP2.26□□□□□ -2.05
SMB1YER029C TRP1P00912 224 aa2.26□□□□□ -2.05
SMB1YER029C NFT1P0CE68 1218 aa2.26□□□□□ -2.05
SMB1YER029C PET123P17558 318 aa2.26□□□□□ -2.05
SMB1YER029C SIN4P32259 974 aa2.26□□□□□ -2.05
SMB1YER029C KAR9P32526 644 aa2.26□□□□□ -2.05
SMB1YER029C RML2P32611 393 aa2.26□□□□□ -2.05
SMB1YER029C SWE1P32944 819 aa2.26□□□□□ -2.05
SMB1YER029C RIB5P38145 238 aa2.26□□□□□ -2.05
SMB1YER029C NDE1P40215 560 aa2.26□□□□□ -2.05
SMB1YER029C SSU1P41930 458 aa2.26□□□□□ -2.05
SMB1YER029C WWM1P43582 211 aaKnown RBP2.26□□□□□ -2.05
SMB1YER029C DLD2P46681 530 aaKnown RBP2.26□□□□□ -2.05
SMB1YER029C NCA3P46955 337 aa2.26□□□□□ -2.05
SMB1YER029C DSL1P53847 754 aa2.26□□□□□ -2.05
SMB1YER029C YMR181CQ03231 154 aa2.26□□□□□ -2.05
SMB1YER029C HER2Q03557 464 aa2.26□□□□□ -2.05
SMB1YER029C GIR2Q03768 265 aaPredicted RBP2.26□□□□□ -2.05
SMB1YER029C TIM18Q08749 192 aa2.26□□□□□ -2.05
SMB1YER029C MUM3Q08750 479 aa2.26□□□□□ -2.05
SMB1YER029C ORT1Q12375 292 aa2.26□□□□□ -2.05
SMB1YER029C TOP1P04786 769 aa2.25□□□□□ -2.05
SMB1YER029C CYC3P06182 269 aa2.25□□□□□ -2.05
SMB1YER029C RPL3P14126 387 aaKnown RBP2.25□□□□□ -2.05
SMB1YER029C RPI1P23250 407 aaKnown RBP2.25□□□□□ -2.05
SMB1YER029C CTR86P25355 563 aa2.25□□□□□ -2.05
SMB1YER029C KRE2P27809 442 aa2.25□□□□□ -2.05
SMB1YER029C MRPL19P53875 158 aa2.25□□□□□ -2.05
SMB1YER029C PPM1Q04081 328 aa2.25□□□□□ -2.05
SMB1YER029C TSA2Q04120 196 aa2.25□□□□□ -2.05
SMB1YER029C PAL1Q05518 499 aaKnown RBP2.25□□□□□ -2.05
SMB1YER029C VTA1Q06263 330 aa2.25□□□□□ -2.05
SMB1YER029C SGT1Q08446 395 aa2.25□□□□□ -2.05
SMB1YER029C ISN1Q99312 450 aa2.25□□□□□ -2.05
SMB1YER029C SLY1P22213 666 aa2.24□□□□□ -2.05
SMB1YER029C RAD57P25301 460 aa2.24□□□□□ -2.05
SMB1YER029C DAL2P25335 343 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms