RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C DPH5P32469 300 aaPredicted RBP10.36□□□□□ -0.75
SPC25YER018C SFA1P32771 386 aa10.36□□□□□ -0.75
SPC25YER018C CAT2P32796 670 aaKnown RBP10.36□□□□□ -0.75
SPC25YER018C ASC1P38011 319 aaKnown RBP10.36□□□□□ -0.75
SPC25YER018C BEM4P39011 633 aa10.36□□□□□ -0.75
SPC25YER018C ERV46P39727 415 aa10.36□□□□□ -0.75
SPC25YER018C PAC11P40960 533 aa10.36□□□□□ -0.75
SPC25YER018C NOP9P47077 666 aaKnown RBP10.36□□□□□ -0.75
SPC25YER018C FHN1P53279 174 aa10.36□□□□□ -0.75
SPC25YER018C NAN1Q02931 896 aaKnown RBP10.36□□□□□ -0.75
SPC25YER018C PDR8Q06149 701 aa10.36□□□□□ -0.75
SPC25YER018C YOL131WQ08270 108 aa10.36□□□□□ -0.75
SPC25YER018C RRP40Q08285 240 aaKnown RBP10.36□□□□□ -0.75
SPC25YER018C LAG2Q92325 660 aa10.36□□□□□ -0.75
SPC25YER018C TY4B-PA0A0B7P3V8 1104 aa10.35□□□□□ -0.75
SPC25YER018C CAN1P04817 590 aa10.35□□□□□ -0.75
SPC25YER018C GAL7P08431 366 aa10.35□□□□□ -0.75
SPC25YER018C RPL1AP0CX43 217 aaKnown RBP10.35□□□□□ -0.75
SPC25YER018C RPL1BP0CX44 217 aaKnown RBP10.35□□□□□ -0.75
SPC25YER018C RAP1P11938 827 aa10.35□□□□□ -0.75
SPC25YER018C SLM5P25345 492 aaKnown RBP10.35□□□□□ -0.75
SPC25YER018C UTH1P36135 365 aa10.35□□□□□ -0.75
SPC25YER018C VRG4P40107 337 aa10.35□□□□□ -0.75
SPC25YER018C FET5P43561 622 aa10.35□□□□□ -0.75
SPC25YER018C ESF2P53743 316 aaKnown RBP10.35□□□□□ -0.75
SPC25YER018C COS7Q07788 383 aa10.35□□□□□ -0.75
SPC25YER018C PSR1Q07800 427 aa10.35□□□□□ -0.75
SPC25YER018C ULA1Q12059 462 aa10.35□□□□□ -0.75
SPC25YER018C YPR022CQ12139 1133 aa10.35□□□□□ -0.75
SPC25YER018C YOL107WQ12239 342 aa10.35□□□□□ -0.75
SPC25YER018C YPR064WQ12492 139 aa10.35□□□□□ -0.75
SPC25YER018C UGA1P17649 471 aa10.34□□□□□ -0.75
SPC25YER018C CWP1P28319 239 aa10.34□□□□□ -0.75
SPC25YER018C ERG1P32476 496 aaKnown RBP10.34□□□□□ -0.75
SPC25YER018C HOG1P32485 435 aa10.34□□□□□ -0.75
SPC25YER018C ECM10P39987 644 aa10.34□□□□□ -0.75
SPC25YER018C PRM10P42946 383 aa10.34□□□□□ -0.75
SPC25YER018C SVL3Q03088 825 aaKnown RBP10.34□□□□□ -0.75
SPC25YER018C SSQ1Q05931 657 aaPredicted RBP10.34□□□□□ -0.75
SPC25YER018C OPT2Q06593 877 aa10.34□□□□□ -0.75
SPC25YER018C MLH3Q12083 715 aa10.34□□□□□ -0.75
SPC25YER018C YPR096CO13587 100 aa10.33□□□□□ -0.76
SPC25YER018C BCY1P07278 416 aaKnown RBP10.33□□□□□ -0.76
SPC25YER018C HOP1P20050 605 aa10.33□□□□□ -0.76
SPC25YER018C PRO1P32264 428 aa10.33□□□□□ -0.76
SPC25YER018C SSO1P32867 290 aa10.33□□□□□ -0.76
SPC25YER018C MED8P38304 223 aa10.33□□□□□ -0.76
SPC25YER018C DSS1P39112 969 aa10.33□□□□□ -0.76
SPC25YER018C MTW1P39731 289 aa10.33□□□□□ -0.76
SPC25YER018C MDJ2P42834 146 aa10.33□□□□□ -0.76
SPC25YER018C PMT4P46971 762 aa10.33□□□□□ -0.76
SPC25YER018C YGR250CP53316 781 aaKnown RBP10.33□□□□□ -0.76
SPC25YER018C MSC1Q03104 513 aa10.33□□□□□ -0.76
SPC25YER018C BOP2Q06150 570 aa10.33□□□□□ -0.76
SPC25YER018C RPS17AP02407 136 aaKnown RBP10.32□□□□□ -0.76
SPC25YER018C ALG7P07286 448 aa10.32□□□□□ -0.76
SPC25YER018C RPS17BP14127 136 aaKnown RBP10.32□□□□□ -0.76
SPC25YER018C NUP2P32499 720 aa10.32□□□□□ -0.76
SPC25YER018C YHR112CP38716 378 aa10.32□□□□□ -0.76
SPC25YER018C YHR218WP38899 603 aa10.32□□□□□ -0.76
SPC25YER018C FAA2P39518 744 aa10.32□□□□□ -0.76
SPC25YER018C NEO1P40527 1151 aa10.32□□□□□ -0.76
SPC25YER018C UGO1Q03327 502 aa10.32□□□□□ -0.76
SPC25YER018C HMO1Q03973 246 aaKnown RBP10.32□□□□□ -0.76
SPC25YER018C STP3Q05937 343 aa10.32□□□□□ -0.76
SPC25YER018C PUN1Q06991 263 aa10.32□□□□□ -0.76
SPC25YER018C PNO1Q99216 274 aaKnown RBP10.32□□□□□ -0.76
SPC25YER018C STE7P06784 515 aa10.31□□□□□ -0.76
SPC25YER018C YAK1P14680 807 aa10.31□□□□□ -0.76
SPC25YER018C DAP2P18962 818 aa10.31□□□□□ -0.76
SPC25YER018C MNN2P38069 597 aa10.31□□□□□ -0.76
SPC25YER018C BNA4P38169 460 aa10.31□□□□□ -0.76
SPC25YER018C LAS21P40367 830 aa10.31□□□□□ -0.76
SPC25YER018C YIL001WP40560 513 aa10.31□□□□□ -0.76
SPC25YER018C ARF3P40994 183 aaRIP-Chip data10.31□□□□□ -0.76not detected
SPC25YER018C FMP33P46998 180 aa10.31□□□□□ -0.76
SPC25YER018C ROG1P53118 685 aa10.31□□□□□ -0.76
SPC25YER018C APC4Q04601 652 aa10.31□□□□□ -0.76
SPC25YER018C RRP45Q05636 305 aaKnown RBP10.31□□□□□ -0.76
SPC25YER018C MFG1Q07684 458 aa10.31□□□□□ -0.76
SPC25YER018C XYL2Q07993 356 aa10.31□□□□□ -0.76
SPC25YER018C PUS9Q12069 462 aa10.31□□□□□ -0.76
SPC25YER018C YAP1P19880 650 aaKnown RBP10.3□□□□□ -0.76
SPC25YER018C MGR1P25573 417 aa10.3□□□□□ -0.76
SPC25YER018C PEX3P28795 441 aa10.3□□□□□ -0.76
SPC25YER018C RCK1P38622 512 aa10.3□□□□□ -0.76
SPC25YER018C MNL1P38888 796 aa10.3□□□□□ -0.76
SPC25YER018C RAD17P48581 401 aa10.3□□□□□ -0.76
SPC25YER018C BNI4P53858 892 aa10.3□□□□□ -0.76
SPC25YER018C YLR036CQ07986 203 aa10.3□□□□□ -0.76
SPC25YER018C LEU9Q12166 604 aaKnown RBP10.3□□□□□ -0.76
SPC25YER018C UGP1P32861 499 aaKnown RBP10.29□□□□□ -0.76
SPC25YER018C SKG1P36169 355 aa10.29□□□□□ -0.76
SPC25YER018C MNN9P39107 395 aaKnown RBP10.29□□□□□ -0.76
SPC25YER018C RPL10P41805 221 aaKnown RBP10.29□□□□□ -0.76
SPC25YER018C DSL1P53847 754 aa10.29□□□□□ -0.76
SPC25YER018C SKI8Q02793 397 aaPredicted RBP10.29□□□□□ -0.76
SPC25YER018C PEX12Q04370 399 aa10.29□□□□□ -0.76
SPC25YER018C IRC13Q08630 104 aa10.29□□□□□ -0.76
SPC25YER018C MMT2Q08970 484 aa10.29□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms