RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	SPS4	P09937	338 aa		4.03	□□□□□ -1.76
NUG1	YER006W	MRP1	P10662	321 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	PET54	P10834	293 aa		4.03	□□□□□ -1.76
NUG1	YER006W	CBP3	P21560	335 aa		4.03	□□□□□ -1.76
NUG1	YER006W	DAL81	P21657	970 aa		4.03	□□□□□ -1.76
NUG1	YER006W	RNR3	P21672	869 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	MBR1	P23493	339 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PET127	P32606	800 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PTC1	P35182	281 aa		4.03	□□□□□ -1.76
NUG1	YER006W	THI80	P35202	319 aa		4.03	□□□□□ -1.76
NUG1	YER006W	JEN1	P36035	616 aa		4.03	□□□□□ -1.76
NUG1	YER006W	SLM4	P38247	162 aa		4.03	□□□□□ -1.76
NUG1	YER006W	KSP1	P38691	1029 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	COS8	P38723	381 aa		4.03	□□□□□ -1.76
NUG1	YER006W	VAB2	P40003	282 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PHM8	P40025	321 aa		4.03	□□□□□ -1.76
NUG1	YER006W	RGI2	P40188	164 aa		4.03	□□□□□ -1.76
NUG1	YER006W	SMX2	P40204	77 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	ICE2	P40499	491 aa		4.03	□□□□□ -1.76
NUG1	YER006W	SIP4	P46954	829 aa		4.03	□□□□□ -1.76
NUG1	YER006W	RPA34	P47006	233 aa	Predicted RBP	4.03	□□□□□ -1.76
NUG1	YER006W	LYS20	P48570	428 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	YPT32	P51996	222 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	CUE3	P53137	624 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	YGR127W	P53275	312 aa		4.03	□□□□□ -1.76
NUG1	YER006W	SLI1	P53304	468 aa		4.03	□□□□□ -1.76
NUG1	YER006W	YNR062C	P53748	327 aa		4.03	□□□□□ -1.76
NUG1	YER006W	MRPL22	P53881	309 aa		4.03	□□□□□ -1.76
NUG1	YER006W	EOS1	P53938	366 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PEX13	P80667	386 aa		4.03	□□□□□ -1.76
NUG1	YER006W	MRPL13	Q02204	264 aa		4.03	□□□□□ -1.76
NUG1	YER006W	ELP3	Q02908	557 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	YDR541C	Q03049	344 aa		4.03	□□□□□ -1.76
NUG1	YER006W	RMT2	Q03305	412 aa		4.03	□□□□□ -1.76
NUG1	YER006W	SCS7	Q03529	384 aa		4.03	□□□□□ -1.76
NUG1	YER006W	RAD30	Q04049	632 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PEX12	Q04370	399 aa		4.03	□□□□□ -1.76
NUG1	YER006W	RQC1	Q05468	723 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	CIA1	Q05583	330 aa		4.03	□□□□□ -1.76
NUG1	YER006W	CDC123	Q05791	360 aa		4.03	□□□□□ -1.76
NUG1	YER006W	BCP1	Q06338	283 aa		4.03	□□□□□ -1.76
NUG1	YER006W	YPR147C	Q06522	304 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	NBA1	Q08229	501 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	SRO7	Q12038	1033 aa		4.03	□□□□□ -1.76
NUG1	YER006W	ULA1	Q12059	462 aa		4.03	□□□□□ -1.76
NUG1	YER006W	FAL1	Q12099	399 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	HAL9	Q12180	1030 aa		4.03	□□□□□ -1.76
NUG1	YER006W	HER1	Q12276	1246 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PNS1	Q12412	539 aa		4.03	□□□□□ -1.76
NUG1	YER006W	WIP1	Q2V2P8	89 aa		4.03	□□□□□ -1.76
NUG1	YER006W	EFG1	Q3E705	233 aa	Known RBP	4.03	□□□□□ -1.76
NUG1	YER006W	RGS2	Q99188	309 aa		4.03	□□□□□ -1.76
NUG1	YER006W	PRC1	P00729	532 aa		4.02	□□□□□ -1.77
NUG1	YER006W	GPH1	P06738	902 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	CBP1	P07252	654 aa		4.02	□□□□□ -1.77
NUG1	YER006W	MATALPHA1	P0CY06	175 aa		4.02	□□□□□ -1.77
NUG1	YER006W	HMLALPHA1	P0CY07	175 aa		4.02	□□□□□ -1.77
NUG1	YER006W	SST2	P11972	698 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	PFK1	P16861	987 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	AAC3	P18238	307 aa		4.02	□□□□□ -1.77
NUG1	YER006W	YSP3	P25036	478 aa		4.02	□□□□□ -1.77
NUG1	YER006W	YIM1	P28625	365 aa		4.02	□□□□□ -1.77
NUG1	YER006W	CCR4	P31384	837 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	TCA17	P32613	152 aa		4.02	□□□□□ -1.77
NUG1	YER006W	LHP1	P33399	275 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	SCO2	P38072	301 aa		4.02	□□□□□ -1.77
NUG1	YER006W	RFT1	P38206	574 aa	Predicted RBP	4.02	□□□□□ -1.77
NUG1	YER006W	MMS4	P38257	691 aa		4.02	□□□□□ -1.77
NUG1	YER006W	SIF2	P38262	535 aa		4.02	□□□□□ -1.77
NUG1	YER006W	SHG1	P38337	142 aa		4.02	□□□□□ -1.77
NUG1	YER006W	GIC1	P38785	314 aa		4.02	□□□□□ -1.77
NUG1	YER006W	STT3	P39007	718 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	EFM4	P40516	257 aa		4.02	□□□□□ -1.77
NUG1	YER006W	MSS2	P40990	351 aa		4.02	□□□□□ -1.77
NUG1	YER006W	PSA1	P41940	361 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	YGR210C	P42942	411 aa		4.02	□□□□□ -1.77
NUG1	YER006W	NET1	P47035	1189 aa		4.02	□□□□□ -1.77
NUG1	YER006W	MRX6	P48564	524 aa		4.02	□□□□□ -1.77
NUG1	YER006W	AMA1	P50082	593 aa		4.02	□□□□□ -1.77
NUG1	YER006W	SLD3	P53135	668 aa		4.02	□□□□□ -1.77
NUG1	YER006W	DRN1	P53255	507 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	CPR6	P53691	371 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	ERG5	P54781	538 aa		4.02	□□□□□ -1.77
NUG1	YER006W	DLT1	Q04216	342 aa		4.02	□□□□□ -1.77
NUG1	YER006W	YLR283W	Q05867	314 aa		4.02	□□□□□ -1.77
NUG1	YER006W	IWR1	Q07532	353 aa	Predicted RBP	4.02	□□□□□ -1.77
NUG1	YER006W	SDO1	Q07953	250 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	YNG1	Q08465	219 aa		4.02	□□□□□ -1.77
NUG1	YER006W	RCN2	Q12044	265 aa		4.02	□□□□□ -1.77
NUG1	YER006W	PIN2	Q12057	282 aa		4.02	□□□□□ -1.77
NUG1	YER006W	HFI1	Q12060	488 aa		4.02	□□□□□ -1.77
NUG1	YER006W	VAM3	Q12241	283 aa		4.02	□□□□□ -1.77
NUG1	YER006W	DGK1	Q12382	290 aa		4.02	□□□□□ -1.77
NUG1	YER006W	GTT2	Q12390	233 aa		4.02	□□□□□ -1.77
NUG1	YER006W	AGC1	Q12482	902 aa		4.02	□□□□□ -1.77
NUG1	YER006W	PGA3	Q12746	312 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	Q0144	Q9ZZW2	109 aa		4.02	□□□□□ -1.77
NUG1	YER006W	ADR1	P07248	1323 aa		4.02	□□□□□ -1.77
NUG1	YER006W	SSA3	P09435	649 aa	Known RBP	4.02	□□□□□ -1.77
NUG1	YER006W	HSF1	P10961	833 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms