RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	SOK1	P40317	901 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	HXT9	P40885	567 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	YJL132W	P47014	750 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	YNR068C	P53754	272 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	BSC5	P53755	489 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	COS1	P53822	381 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	ALG11	P53954	548 aa	Known RBP	4.85	□□□□□ -1.63
PAL1	YDR348C	MPS1	P54199	764 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	YMR010W	Q03687	405 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	RKM2	Q03942	479 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	YLR345W	Q06137	509 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	SWA2	Q06677	668 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	TPO1	Q07824	586 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	ENV7	Q12003	364 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	YOL107W	Q12239	342 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	RIB3	Q99258	208 aa		4.85	□□□□□ -1.63
PAL1	YDR348C	BAR1	P12630	587 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	RPL3	P14126	387 aa	Known RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	ERS1	P17261	260 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	KIN82	P25341	720 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	COT1	P32798	439 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	CBT1	P36038	271 aa	Predicted RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	APT2	P36973	181 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	HSL7	P38274	827 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YEN1	P40028	759 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	COA1	P40452	197 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	SLS1	P42900	643 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	CAF16	P43569	289 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	GYP8	P43570	497 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	PTR3	P43606	678 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	RRT5	P43607	289 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	LSM1	P47017	172 aa	Known RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	YJL049W	P47048	450 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	UPF3	P48412	387 aa	Known RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	UBC12	P52491	188 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YGL036W	P53185	909 aa	Predicted RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	YNR014W	P53719	212 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
PAL1	YDR348C	PRP38	Q00723	242 aa	Predicted RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
PAL1	YDR348C	RMI1	Q02685	241 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YPL071C	Q02864	156 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YML131W	Q03102	365 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	EFR3	Q03653	782 aa	Known RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	GAS3	Q03655	524 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	TRM82	Q03774	444 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	RPN9	Q04062	393 aa	Known RBP	4.84	□□□□□ -1.63
PAL1	YDR348C	BNA7	Q04066	261 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	TDA6	Q06466	467 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YLR352W	Q06479	807 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YLR413W	Q06689	675 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YOL019W	Q08157	551 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	PIN2	Q12057	282 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	HAL9	Q12180	1030 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YOR131C	Q12486	218 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	PCD1	Q12524	340 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	YKL018C-A	Q3E7A7	99 aa		4.84	□□□□□ -1.63
PAL1	YDR348C	GAL1	P04385	528 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	EMC1	P25574	760 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YCR090C	P25654	182 aa	Known RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	ERG9	P29704	444 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	PET309	P32522	965 aa	Predicted RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	CDC5	P32562	705 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	STE14	P32584	239 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	AIM26	P32858	118 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	SDH3	P33421	198 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	NOP4	P37838	685 aa	Known RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	BIG1	P38813	335 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	SSO2	P39926	295 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YER184C	P39961	794 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	ZRG8	P40021	1076 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	COG3	P40094	801 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	VRG4	P40107	337 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YIL077C	P40508	320 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	SEC28	P40509	296 aa	Known RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	GSC2	P40989	1895 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	SSY5	P47002	699 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	NQM1	P53228	333 aa	Predicted RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	PEF1	P53238	335 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YGR127W	P53275	312 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	RTT102	P53330	157 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	PET117	Q02771	107 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	NHX1	Q04121	633 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	RCO1	Q04779	684 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YLR257W	Q06146	321 aa	Known RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	PHO92	Q06390	306 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	ARO10	Q06408	635 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	CRN1	Q06440	651 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YEH1	Q07804	573 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	DIS3	Q08162	1001 aa	Known RBP	4.83	□□□□□ -1.64
PAL1	YDR348C	GAS5	Q08193	484 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	NRT1	Q08485	598 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	IES4	Q08561	116 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YOR022C	Q12204	715 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	HOS1	Q12214	470 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	MHF2	Q3E829	80 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YPR053C	Q6Q5F3	151 aa		4.83	□□□□□ -1.64
PAL1	YDR348C	YBR085C-A	O43137	85 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SIR3	P06701	978 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	RAD52	P06778	471 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms