RNA–Protein interactions for RNA: YDR346C

SVF1, Transcript of Protein with a potential role in cell survival pathways, yeast

Gene SVF1, Length 1,446 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SVF1	YDR346C	AFG1	P32317	509 aa		5.02	□□□□□ -1.61
SVF1	YDR346C	HXT3	P32466	567 aa	Known RBP	5.02	□□□□□ -1.61
SVF1	YDR346C	FMP46	P36141	133 aa	Known RBP	5.02	□□□□□ -1.61
SVF1	YDR346C	RTT101	P47050	842 aa		5.02	□□□□□ -1.61
SVF1	YDR346C	YGR149W	P48236	432 aa		5.02	□□□□□ -1.61
SVF1	YDR346C	DNF3	Q12674	1656 aa		5.02	□□□□□ -1.61
SVF1	YDR346C	RAD50	P12753	1312 aa		5.01	□□□□□ -1.61
SVF1	YDR346C	RPL15A	P05748	204 aa	Known RBP	5.01	□□□□□ -1.61
SVF1	YDR346C	OTU2	P38747	307 aa	Known RBP	5.01	□□□□□ -1.61
SVF1	YDR346C	VMA13	P41807	478 aa	Known RBP	5.01	□□□□□ -1.61
SVF1	YDR346C	YGR250C	P53316	781 aa	Known RBP	5.01	□□□□□ -1.61
SVF1	YDR346C	RPA49	Q01080	415 aa	Predicted RBP	5.01	□□□□□ -1.61
SVF1	YDR346C	IRC15	Q02733	499 aa		5.01	□□□□□ -1.61
SVF1	YDR346C	BRR1	Q99177	341 aa	Predicted RBP	5.01	□□□□□ -1.61
SVF1	YDR346C	MTF1	P14908	341 aa	Known RBP	5	□□□□□ -1.61
SVF1	YDR346C	YUR1	P26725	428 aa		5	□□□□□ -1.61
SVF1	YDR346C	FUN19	P28003	413 aa	Predicted RBP	5	□□□□□ -1.61
SVF1	YDR346C	RAD14	P28519	371 aa		5	□□□□□ -1.61
SVF1	YDR346C	MPE1	P35728	441 aa	Known RBP	5	□□□□□ -1.61
SVF1	YDR346C	BYE1	P36106	594 aa		5	□□□□□ -1.61
SVF1	YDR346C	THI2	P38141	450 aa		5	□□□□□ -1.61
SVF1	YDR346C	MTC4	P38335	694 aa	Known RBP	5	□□□□□ -1.61
SVF1	YDR346C	DHH1	P39517	506 aa	Known RBP	5	□□□□□ -1.61
SVF1	YDR346C	RPR2	P40571	144 aa		5	□□□□□ -1.61
SVF1	YDR346C	HCR1	Q05775	265 aa	Known RBP	5	□□□□□ -1.61
SVF1	YDR346C	KEL3	Q08979	651 aa	Predicted RBP	5	□□□□□ -1.61
SVF1	YDR346C	RRD2	Q12461	358 aa		5	□□□□□ -1.61
SVF1	YDR346C	RPO41	P13433	1351 aa	Known RBP	4.99	□□□□□ -1.61
SVF1	YDR346C	CLB3	P24870	427 aa		4.99	□□□□□ -1.61
SVF1	YDR346C	NPL6	P32832	435 aa		4.99	□□□□□ -1.61
SVF1	YDR346C	LSM5	P40089	93 aa	Known RBP	4.99	□□□□□ -1.61
SVF1	YDR346C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
SVF1	YDR346C	SET6	Q12529	373 aa		4.99	□□□□□ -1.61
SVF1	YDR346C	YMR230W-A	Q3E7B5	62 aa		4.99	□□□□□ -1.61
SVF1	YDR346C	AUS1	Q08409	1394 aa		4.99	□□□□□ -1.61
SVF1	YDR346C	ATP10	P18496	279 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	EXO70	P19658	623 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	BUB3	P26449	341 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	YIM1	P28625	365 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	PRO3	P32263	286 aa	Known RBP	4.98	□□□□□ -1.61
SVF1	YDR346C	SHO1	P40073	367 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	VTC2	P43585	828 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	MNP1	P53163	194 aa	Predicted RBP	4.98	□□□□□ -1.61
SVF1	YDR346C	NKP2	Q06162	153 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	SIL1	Q08199	421 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	AYT1	Q12226	474 aa		4.98	□□□□□ -1.61
SVF1	YDR346C	SPC110	P32380	944 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	TUL1	P36096	758 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	RPH1	P39956	796 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	DLD2	P46681	530 aa	Known RBP	4.97	□□□□□ -1.61
SVF1	YDR346C	RSC1	P53236	928 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	SFI1	Q12369	946 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	RHO2	P06781	192 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	NFU1	P32860	256 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	LOS1	P33418	1100 aa	Predicted RBP	4.97	□□□□□ -1.61
SVF1	YDR346C	HAT2	P39984	401 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	FAU1	P40099	211 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	GWT1	P47026	490 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	HST1	P53685	503 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	ARX1	Q03862	593 aa	Known RBP	4.97	□□□□□ -1.61
SVF1	YDR346C	SPC19	Q03954	165 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	VTA1	Q06263	330 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	VPS74	Q06385	345 aa		4.97	□□□□□ -1.61
SVF1	YDR346C	HEM2	P05373	342 aa		4.96	□□□□□ -1.62
SVF1	YDR346C	RNR2	P09938	399 aa	Known RBP	4.96	□□□□□ -1.62
SVF1	YDR346C	RPL20A	P0CX23	172 aa	Known RBP	4.96	□□□□□ -1.62
SVF1	YDR346C	RPL20B	P0CX24	172 aa	Predicted RBP	4.96	□□□□□ -1.62
SVF1	YDR346C	FRE2	P36033	711 aa		4.96	□□□□□ -1.62
SVF1	YDR346C	MDM31	P38880	579 aa		4.96	□□□□□ -1.62
SVF1	YDR346C	ELP2	P42935	788 aa		4.96	□□□□□ -1.62
SVF1	YDR346C	YNL050C	P53952	270 aa		4.96	□□□□□ -1.62
SVF1	YDR346C	LEU4	P06208	619 aa	Known RBP	4.95	□□□□□ -1.62
SVF1	YDR346C	SPS4	P09937	338 aa		4.95	□□□□□ -1.62
SVF1	YDR346C	AGA1	P32323	725 aa		4.95	□□□□□ -1.62
SVF1	YDR346C	MFT1	P33441	392 aa	Known RBP	4.95	□□□□□ -1.62
SVF1	YDR346C	PMU1	P36069	295 aa		4.95	□□□□□ -1.62
SVF1	YDR346C	CBP4	P37267	147 aa		4.95	□□□□□ -1.62
SVF1	YDR346C	RSM25	P40496	264 aa		4.95	□□□□□ -1.62
SVF1	YDR346C	ERP1	Q05359	219 aa	Known RBP	4.95	□□□□□ -1.62
SVF1	YDR346C	ROM2	P51862	1356 aa	Known RBP	4.94	□□□□□ -1.62
SVF1	YDR346C	GDH1	P07262	454 aa	Known RBP	4.94	□□□□□ -1.62
SVF1	YDR346C	MCK1	P21965	375 aa	Known RBP	4.94	□□□□□ -1.62
SVF1	YDR346C	HCS1	P34243	683 aa		4.94	□□□□□ -1.62
SVF1	YDR346C	KRE9	P39005	276 aa		4.94	□□□□□ -1.62
SVF1	YDR346C	ISC1	P40015	477 aa	Known RBP	4.94	□□□□□ -1.62
SVF1	YDR346C	ALG8	P40351	577 aa		4.94	□□□□□ -1.62
SVF1	YDR346C	HYR1	P40581	163 aa	Known RBP	4.94	□□□□□ -1.62
SVF1	YDR346C	URB2	P47108	1174 aa		4.94	□□□□□ -1.62
SVF1	YDR346C	RMD9	P53140	646 aa	Known RBP	4.94	□□□□□ -1.62
SVF1	YDR346C	MDG1	P53885	366 aa		4.94	□□□□□ -1.62
SVF1	YDR346C	CSI1	Q04368	295 aa		4.94	□□□□□ -1.62
SVF1	YDR346C	RPS19A	P07280	144 aa	Known RBP	4.93	□□□□□ -1.62
SVF1	YDR346C	RPS19B	P07281	144 aa	Predicted RBP	4.93	□□□□□ -1.62
SVF1	YDR346C	RML2	P32611	393 aa		4.93	□□□□□ -1.62
SVF1	YDR346C	RSM22	P36056	628 aa		4.93	□□□□□ -1.62
SVF1	YDR346C	TCD1	P38756	429 aa		4.93	□□□□□ -1.62
SVF1	YDR346C	YJL213W	P40896	331 aa		4.93	□□□□□ -1.62
SVF1	YDR346C	YDL186W	P48568	277 aa		4.93	□□□□□ -1.62
SVF1	YDR346C	VPS20	Q04272	221 aa		4.93	□□□□□ -1.62
SVF1	YDR346C	YBR298C-A	Q8TGK4	73 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms