RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	TCP1	P12612	559 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	GRR1	P24814	1151 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	PER1	P25625	357 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	LYP1	P32487	611 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	STE14	P32584	239 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	PTM1	P32857	523 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	VPS17	P32913	551 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	CST26	P38226	397 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	VID24	P38263	362 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YHR033W	P38690	423 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	OSH7	P38755	437 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	SSN3	P39073	555 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	GEM1	P39722	662 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YER184C	P39961	794 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	EDC3	P39998	551 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	FIR1	P40020	876 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YJL016W	P47072	561 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	SCW11	P53189	542 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	DAM1	P53267	343 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	TOF2	Q02208	771 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YPL071C	Q02864	156 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	PMT7	Q06644	662 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	IES4	Q08561	116 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	NBP2	Q12163	236 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	LCB4	Q12246	624 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	PST2	Q12335	198 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	IZH4	Q99393	312 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	CUP1-1	P0CX80	61 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	CUP1-2	P0CX81	61 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	GUK1	P15454	187 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	FRS1	P15624	595 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	ATP12	P22135	325 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YCL049C	P25577	312 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	MRP4	P32902	394 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	SRY1	P36007	326 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	BET3	P36149	193 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	KTR4	P38131	464 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YBR225W	P38321	900 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	RAD55	P38953	406 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	VRG4	P40107	337 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	CNN1	P43618	361 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	RMD8	P43620	662 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YPT32	P51996	222 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	IMA1	P53051	589 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	STR3	P53101	465 aa	Known RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	NQM1	P53228	333 aa	Predicted RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	YNL146W	P53906	100 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	CRR1	Q05790	422 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	RRG7	Q08774	242 aa	Predicted RBP	4.16	□□□□□ -1.74
UPC2	YDR213W	PSF3	Q12146	194 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YOR214C	Q12282	236 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YPL119C-A	Q3E751	87 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	YKL018C-A	Q3E7A7	99 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	MHF2	Q3E829	80 aa		4.16	□□□□□ -1.74
UPC2	YDR213W	GAL1	P04385	528 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	COS2	P0CX12	379 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	COS3	P0CX13	379 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	CNB1	P25296	175 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YCR090C	P25654	182 aa	Known RBP	4.15	□□□□□ -1.74
UPC2	YDR213W	COT1	P32798	439 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	MSN2	P33748	704 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	MRPL3	P36516	390 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	KSP1	P38691	1029 aa	Known RBP	4.15	□□□□□ -1.74
UPC2	YDR213W	FET3	P38993	636 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YIR007W	P40566	764 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YJR120W	P47157	116 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	CWC24	P53769	259 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YNL181W	P53878	407 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	STP1	Q00947	519 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	PET117	Q02771	107 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	PFA5	Q03289	374 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YDR249C	Q03787	373 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YLR345W	Q06137	509 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YPL199C	Q08954	240 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	LYS21	Q12122	440 aa	Known RBP	4.15	□□□□□ -1.74
UPC2	YDR213W	UPC2	Q12151	913 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YLL058W	Q12198	575 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	SNF8	Q12483	233 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YIL002W-A	Q3E7Z5	69 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	YOS9	Q99220	542 aa		4.15	□□□□□ -1.74
UPC2	YDR213W	DED1	P06634	604 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	MAS2	P11914	482 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	PRP28	P23394	588 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	EMC1	P25574	760 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	DPH2	P32461	534 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	GSH1	P32477	678 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	MRPL7	P36519	292 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	APM3	P38153	483 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YHR202W	P38887	602 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	ERP2	P39704	215 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	MPS3	P47069	682 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SPT20	P50875	604 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	PRM8	P53174	237 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	COS1	P53822	381 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SMA1	Q02651	245 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YPL068C	Q02749	293 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SNZ1	Q03148	297 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SPO20	Q04359	397 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	DFG5	Q05031	458 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	NNT1	Q05874	261 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms