RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	YHB1	P39676	399 aa	Known RBP	4.64	□□□□□ -1.67
TRM8	YDL201W	SHQ1	P40486	507 aa	Predicted RBP	4.64	□□□□□ -1.67
TRM8	YDL201W	OTU1	P43558	301 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	UBX6	P47049	396 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	RPS7B	P48164	190 aa	Known RBP	4.64	□□□□□ -1.67
TRM8	YDL201W	SPT20	P50875	604 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	SPC98	P53540	846 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	ECM30	Q06673	1274 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	YFT2	Q06676	274 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	YLL007C	Q07799	665 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	RKM1	Q08961	583 aa	Predicted RBP	4.64	□□□□□ -1.67
TRM8	YDL201W	YOL107W	Q12239	342 aa		4.64	□□□□□ -1.67
TRM8	YDL201W	PRS5	Q12265	496 aa	Known RBP	4.64	□□□□□ -1.67
TRM8	YDL201W	GPH1	P06738	902 aa	Known RBP	4.63	□□□□□ -1.67
TRM8	YDL201W	ERG11	P10614	530 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	PCT1	P13259	424 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	PMR1	P13586	950 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	ECM25	P32525	599 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	TIF3	P34167	436 aa	Known RBP	4.63	□□□□□ -1.67
TRM8	YDL201W	SDH8	P38345	138 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	MSR1	P38714	643 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	YER130C	P39959	443 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	PIG2	P40187	538 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	YMR147W	P40218	223 aa	Known RBP	4.63	□□□□□ -1.67
TRM8	YDL201W	ATM1	P40416	690 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	YIR042C	P40586	236 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	DPB11	P47027	764 aa	Predicted RBP	4.63	□□□□□ -1.67
TRM8	YDL201W	MRK1	P50873	501 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	IMO32	P53219	342 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	YGR126W	P53274	230 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	RTT102	P53330	157 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	NRG1	Q03125	231 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	USA1	Q03714	838 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	SMA2	Q04658	369 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	SHS1	Q07657	551 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	SIL1	Q08199	421 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	VAM3	Q12241	283 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	SFG1	Q12507	346 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	YER175W-A	Q8TGU4	54 aa		4.63	□□□□□ -1.67
TRM8	YDL201W	UTP10	P42945	1769 aa	Known RBP	4.63	□□□□□ -1.67
TRM8	YDL201W	PRB1	P09232	635 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	RPL31B	P0C2H9	113 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	THR4	P16120	514 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	KGD2	P19262	463 aa	Predicted RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	SAG1	P20840	650 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	PUP3	P25451	205 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	IMG1	P25626	169 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	RFA2	P26754	273 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	PRO3	P32263	286 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	RIM1	P32445	135 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	SOF1	P33750	489 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	NTR2	P36118	322 aa	Predicted RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	KAP104	P38217	918 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	RIX1	P38883	763 aa	Predicted RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	TMN3	P40071	706 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	PTR3	P43606	678 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	YGR079W	P53249	370 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	YNL146W	P53906	100 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	EAF7	P53911	425 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	YNL134C	P53912	376 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	REX2	P54964	269 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	GCN5	Q03330	439 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	RSN1	Q03516	953 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	CAB5	Q03941	241 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	BNA7	Q04066	261 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	LSP1	Q12230	341 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	RIB2	Q12362	591 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	PNS1	Q12412	539 aa		4.62	□□□□□ -1.67
TRM8	YDL201W	HRP1	Q99383	534 aa	Known RBP	4.62	□□□□□ -1.67
TRM8	YDL201W	CYC1	P00044	109 aa	Predicted RBP	4.61	□□□□□ -1.67
TRM8	YDL201W	RHO2	P06781	192 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	MEK1	P24719	497 aa	Predicted RBP	4.61	□□□□□ -1.67
TRM8	YDL201W	ADY2	P25613	283 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	FEN2	P25621	512 aa	Known RBP	4.61	□□□□□ -1.67
TRM8	YDL201W	ICL1	P28240	557 aa	Predicted RBP	4.61	□□□□□ -1.67
TRM8	YDL201W	YIM1	P28625	365 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	HIR2	P32480	875 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	SIP1	P32578	815 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	STE14	P32584	239 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	KDX1	P36005	433 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	LHS1	P36016	881 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	YBR139W	P38109	508 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	ICS2	P38284	255 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	YHR045W	P38775	560 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	MTW1	P39731	289 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	YIP5	P53108	310 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	PIB2	P53191	635 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	CAF130	P53280	1122 aa	Predicted RBP	4.61	□□□□□ -1.67
TRM8	YDL201W	RET3	P53600	189 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	YNL260C	P53846	198 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	TEX1	P53851	422 aa	Known RBP	4.61	□□□□□ -1.67
TRM8	YDL201W	ESBP6	P53918	673 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	EKI1	Q03764	534 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	IPK1	Q06667	281 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	LOT6	Q07923	191 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	NRT1	Q08485	598 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	RUP1	Q12242	671 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	GLE1	Q12315	538 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	RRD2	Q12461	358 aa		4.61	□□□□□ -1.67
TRM8	YDL201W	TRM11	Q12463	433 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms