RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	MVD1	P32377	396 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	SAC6	P32599	642 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	PET127	P32606	800 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	CDC13	P32797	924 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	NGR1	P32831	672 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	CSG2	P35206	410 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YCR087C-A	P37263	153 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	DTR1	P38125	572 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	LDH1	P38139	375 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PPS1	P38148	807 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YBR284W	P38150	797 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	FMP23	P38231	175 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YHR202W	P38887	602 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	FET3	P38993	636 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	GIP2	P40036	548 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	BUR6	P40096	142 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	MET28	P40573	187 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PRM10	P42946	383 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	COG1	P53079	417 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	MET13	P53128	600 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PNC1	P53184	216 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	YGR017W	P53210	297 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YNL040W	P53960	456 aa	Predicted RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	YMR210W	Q03649	449 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	ENT5	Q03769	411 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	GIS1	Q03833	894 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	CRR1	Q05790	422 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	BUR2	Q05949	395 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YLR177W	Q06251	628 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	CUR1	Q06469	252 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	FRE3	Q08905	711 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	TRE1	Q08919	783 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YRA1	Q12159	226 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	EMP46	Q12396	444 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	YOP1	Q12402	180 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	EFG1	Q3E705	233 aa	Known RBP	5.64	□□□□□ -1.51
SUB2	YDL084W	NBL1	Q3E7Y6	73 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	DFG16	Q99234	619 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	PET20	Q99373	253 aa		5.64	□□□□□ -1.51
SUB2	YDL084W	CDC28	P00546	298 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	FRS2	P15625	503 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	ZRC1	P20107	442 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	ARG1	P22768	420 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	CPR2	P23285	205 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	GSY1	P23337	708 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	PRE7	P23724	241 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	CHA1	P25379	360 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	PPA2	P28239	310 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	NDI1	P32340	513 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	SOF1	P33750	489 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	SEF1	P34228	1148 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	CLG1	P35190	452 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	MCH2	P36032	473 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	JEN1	P36035	616 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	DOA1	P36037	715 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	SHM2	P37291	469 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	SHE3	P38272	425 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	DIA4	P38705	446 aa	Predicted RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	SEO1	P39709	593 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	UBP5	P39944	805 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	AVT6	P40074	448 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	YER121W	P40076	114 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	PRM2	P40534	656 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	CFD1	P40558	293 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	EMW1	P42842	904 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	PFD1	P46988	109 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	YJR149W	P47177	404 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	RFX1	P48743	811 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	NBP35	P52920	328 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	YGR066C	P53242	292 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	TEP1	P53916	434 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	YNL115C	P53925	644 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	MTQ1	P53944	314 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	PEX13	P80667	386 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
SUB2	YDL084W	MRPL13	Q02204	264 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	OST6	Q03723	332 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	TRM82	Q03774	444 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	RQC1	Q05468	723 aa	Known RBP	5.63	□□□□□ -1.51
SUB2	YDL084W	YLR283W	Q05867	314 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	SKG3	Q06315	1026 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	YDR306C	Q06640	478 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	SYT1	Q06836	1226 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	GUD1	Q07729	489 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	UBX3	Q12229	455 aa		5.63	□□□□□ -1.51
SUB2	YDL084W	HAP1	P0CE41	1502 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	PSK1	P31374	1356 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	HTB1	P02293	131 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	HTB2	P02294	131 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	RPL24A	P04449	155 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	PEP5	P12868	1029 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	TOP3	P13099	656 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	YCP4	P25349	247 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	RSA4	P25382	515 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	HRR25	P29295	494 aa	Known RBP	5.62	□□□□□ -1.51
SUB2	YDL084W	SPR1	P32603	445 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	PDR3	P33200	976 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	SHP1	P34223	423 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	PTC1	P35182	281 aa		5.62	□□□□□ -1.51
SUB2	YDL084W	GEX2	P36173	615 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms