RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	FIG1	P38224	298 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	RPH1	P39956	796 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	YEL025C	P39991	1188 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	YKE4	P40544	346 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	TOS3	P43637	560 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	IMD3	P50095	523 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	SLD3	P53135	668 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	IMP4	P53941	290 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	ORC3	P54790	616 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ISU1	Q03020	165 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	ADI1	Q03677	179 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	CDA1	Q06702	301 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	PUS7	Q08647	676 aa	Known RBP	4.93	□□□□□ -1.62
TUP1	YCR084C	YOL107W	Q12239	342 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	BMT6	Q12291	365 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	TSC13	Q99190	310 aa		4.93	□□□□□ -1.62
TUP1	YCR084C	COR1	P07256	457 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	MSF1	P08425	469 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	SBA1	P28707	216 aa	Known RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	AFG1	P32317	509 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	SRP102	P36057	244 aa	Predicted RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	YBR139W	P38109	508 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	NEM1	P38757	446 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	PFK26	P40433	827 aa	Known RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	AGP3	P43548	558 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	CAF16	P43569	289 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	NSA1	P53136	463 aa	Predicted RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	VAC7	P53950	1165 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	RPL22B	P56628	122 aa	Known RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	SED5	Q01590	340 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	MTG1	Q03151	367 aa	Predicted RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	SLD5	Q03406	294 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	YMD8	Q03697	442 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	PEX12	Q04370	399 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	CRF1	Q04930	467 aa		4.92	□□□□□ -1.62
TUP1	YCR084C	YMR226C	Q05016	267 aa	Known RBP	4.92	□□□□□ -1.62
TUP1	YCR084C	CHO2	P05374	869 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	KIN28	P06242	306 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	COS2	P0CX12	379 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	COS3	P0CX13	379 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MATALPHA1	P0CY06	175 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	HMLALPHA1	P0CY07	175 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	GPA2	P10823	449 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	HEM15	P16622	393 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	HPR1	P17629	752 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	COQ1	P18900	473 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	ERG6	P25087	383 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	CPR4	P25334	318 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
TUP1	YCR084C	RAD14	P28519	371 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MCM5	P29496	775 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	CYM1	P32898	989 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	CLG1	P35190	452 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	PET10	P36139	283 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	TAT1	P38085	619 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MAL32	P38158	584 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	RRT2	P38332	387 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YBR259W	P38338	688 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	TSC10	P38342	320 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MMS21	P38632	267 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	HIS2	P38635	335 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	UBA4	P38820	440 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	UBP9	P39967	754 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	GID8	P40208	455 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YJL107C	P42947	387 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	IRC8	P47046	822 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	RTT102	P53330	157 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MAL12	P53341	584 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YNL143C	P53908	130 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	SNX41	Q04053	625 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	HDA2	Q06629	674 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	RFU1	Q08003	200 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	SNX3	Q08826	162 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	STE2	D6VTK4	431 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	LEU4	P06208	619 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	REV1	P12689	985 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	NDI1	P32340	513 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MRT4	P33201	236 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	RPF2	P36160	344 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	DUG2	P38149	878 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YBR197C	P38306	217 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	END3	P39013	349 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	SEN34	P39707	275 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	SEC72	P39742	193 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	YAT2	P40017	923 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MMF1	P40185	145 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	SOK1	P40317	901 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	PRK1	P40494	810 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YFH7	P43591	353 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YFR018C	P43599	363 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	IDS2	P46958	469 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	MND1	P53102	219 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	SHY1	P53266	389 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	NOG2	P53742	486 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	MPS1	P54199	764 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	PRP38	Q00723	242 aa	Predicted RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	DAL4	Q04895	635 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YDR278C	Q05612	105 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	CDC123	Q05791	360 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	DUS3	Q06053	668 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms