RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A ROK1P45818 564 aaPredicted RBP3.18□□□□□ -1.9
RIM1YCR028C-A PET130P47065 347 aa3.18□□□□□ -1.9
RIM1YCR028C-A CAF130P53280 1122 aaPredicted RBP3.18□□□□□ -1.9
RIM1YCR028C-A GIS2P53849 153 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
RIM1YCR028C-A IMP4P53941 290 aaKnown RBP3.18□□□□□ -1.9
RIM1YCR028C-A MFB1Q04922 465 aa3.18□□□□□ -1.9
RIM1YCR028C-A ALE1Q08548 619 aa3.18□□□□□ -1.9
RIM1YCR028C-A YPL150WQ12152 901 aa3.18□□□□□ -1.9
RIM1YCR028C-A ARG3P05150 338 aa3.17□□□□□ -1.9
RIM1YCR028C-A COR1P07256 457 aa3.17□□□□□ -1.9
RIM1YCR028C-A LPD1P09624 499 aaKnown RBP3.17□□□□□ -1.9
RIM1YCR028C-A RNA1P11745 407 aaKnown RBP3.17□□□□□ -1.9
RIM1YCR028C-A EXO70P19658 623 aa3.17□□□□□ -1.9
RIM1YCR028C-A CLB1P24868 471 aa3.17□□□□□ -1.9
RIM1YCR028C-A RDS1P25611 832 aa3.17□□□□□ -1.9
RIM1YCR028C-A CPR3P25719 182 aa3.17□□□□□ -1.9
RIM1YCR028C-A MRE11P32829 692 aa3.17□□□□□ -1.9
RIM1YCR028C-A PMU1P36069 295 aa3.17□□□□□ -1.9
RIM1YCR028C-A CST26P38226 397 aa3.17□□□□□ -1.9
RIM1YCR028C-A YHR218WP38899 603 aa3.17□□□□□ -1.9
RIM1YCR028C-A YEL057CP39983 233 aa3.17□□□□□ -1.9
RIM1YCR028C-A RBS1Q05672 457 aaKnown RBP3.17□□□□□ -1.9
RIM1YCR028C-A RRI2Q12348 645 aa3.17□□□□□ -1.9
RIM1YCR028C-A BRR1Q99177 341 aaPredicted RBP3.17□□□□□ -1.9
RIM1YCR028C-A SWI1P09547 1314 aa3.17□□□□□ -1.9
RIM1YCR028C-A USO1P25386 1790 aa3.16□□□□□ -1.9
RIM1YCR028C-A MES1P00958 751 aaKnown RBP3.16□□□□□ -1.9
RIM1YCR028C-A HEM2P05373 342 aa3.16□□□□□ -1.9
RIM1YCR028C-A RPL22AP05749 121 aaKnown RBP3.16□□□□□ -1.9
RIM1YCR028C-A MATALPHA2P0CY08 210 aa3.16□□□□□ -1.9
RIM1YCR028C-A HMLALPHA2P0CY09 210 aa3.16□□□□□ -1.9
RIM1YCR028C-A HSC82P15108 705 aaKnown RBP3.16□□□□□ -1.9
RIM1YCR028C-A GLK1P17709 500 aaKnown RBP3.16□□□□□ -1.9
RIM1YCR028C-A OPI1P21957 404 aa3.16□□□□□ -1.9
RIM1YCR028C-A OCA4P25366 362 aa3.16□□□□□ -1.9
RIM1YCR028C-A RRP1P35178 278 aaPredicted RBP3.16□□□□□ -1.9
RIM1YCR028C-A TUL1P36096 758 aa3.16□□□□□ -1.9
RIM1YCR028C-A RFT1P38206 574 aaPredicted RBP3.16□□□□□ -1.9
RIM1YCR028C-A MUM2P38236 366 aa3.16□□□□□ -1.9
RIM1YCR028C-A CAJ1P39101 391 aa3.16□□□□□ -1.9
RIM1YCR028C-A NOC2P39744 710 aaKnown RBP3.16□□□□□ -1.9
RIM1YCR028C-A HAT2P39984 401 aa3.16□□□□□ -1.9
RIM1YCR028C-A ALG8P40351 577 aa3.16□□□□□ -1.9
RIM1YCR028C-A POP1P41812 875 aa3.16□□□□□ -1.9
RIM1YCR028C-A RMT2Q03305 412 aa3.16□□□□□ -1.9
RIM1YCR028C-A COG4Q06096 861 aa3.16□□□□□ -1.9
RIM1YCR028C-A CFT2Q12102 859 aaPredicted RBP3.16□□□□□ -1.9
RIM1YCR028C-A SEC39Q12745 709 aa3.16□□□□□ -1.9
RIM1YCR028C-A YRF1-2P40105 1681 aa3.16□□□□□ -1.9
RIM1YCR028C-A BNI1P41832 1953 aa3.15□□□□□ -1.91
RIM1YCR028C-A RPL31BP0C2H9 113 aaKnown RBP3.15□□□□□ -1.91
RIM1YCR028C-A ATR1P13090 542 aa3.15□□□□□ -1.91
RIM1YCR028C-A FUN19P28003 413 aaPredicted RBP3.15□□□□□ -1.91
RIM1YCR028C-A YEL043WP32618 956 aa3.15□□□□□ -1.91
RIM1YCR028C-A ERP2P39704 215 aa3.15□□□□□ -1.91
RIM1YCR028C-A ARF3P40994 183 aaRIP-Chip data3.15□□□□□ -1.91not detected
RIM1YCR028C-A ELP2P42935 788 aa3.15□□□□□ -1.91
RIM1YCR028C-A TWF1P53250 332 aa3.15□□□□□ -1.91
RIM1YCR028C-A SUB1P54000 292 aaKnown RBP3.15□□□□□ -1.91
RIM1YCR028C-A TIM10P87108 93 aa3.15□□□□□ -1.91
RIM1YCR028C-A MRS2Q01926 470 aa3.15□□□□□ -1.91
RIM1YCR028C-A RKM5Q12367 367 aa3.15□□□□□ -1.91
RIM1YCR028C-A SNU66Q12420 587 aaPredicted RBP3.15□□□□□ -1.91
RIM1YCR028C-A YDL007C-AQ2V2Q0 85 aa3.15□□□□□ -1.91
RIM1YCR028C-A TY1B-NL2Q99337 1749 aaKnown RBP3.15□□□□□ -1.91
RIM1YCR028C-A PET123P17558 318 aa3.14□□□□□ -1.91
RIM1YCR028C-A OSM1P21375 501 aaKnown RBP3.14□□□□□ -1.91
RIM1YCR028C-A PMT1P33775 817 aa3.14□□□□□ -1.91
RIM1YCR028C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
RIM1YCR028C-A YBP1P38315 674 aa3.14□□□□□ -1.91
RIM1YCR028C-A KEL1P38853 1164 aaKnown RBP3.14□□□□□ -1.91
RIM1YCR028C-A DSN1P40568 576 aa3.14□□□□□ -1.91
RIM1YCR028C-A YJL132WP47014 750 aa3.14□□□□□ -1.91
RIM1YCR028C-A WSC2P53832 503 aa3.14□□□□□ -1.91
RIM1YCR028C-A CTF3Q12748 733 aa3.14□□□□□ -1.91
RIM1YCR028C-A HSP82P02829 709 aaKnown RBP3.13□□□□□ -1.91
RIM1YCR028C-A BUB3P26449 341 aa3.13□□□□□ -1.91
RIM1YCR028C-A ATP11P32453 318 aa3.13□□□□□ -1.91
RIM1YCR028C-A NFU1P32860 256 aa3.13□□□□□ -1.91
RIM1YCR028C-A FRE2P36033 711 aa3.13□□□□□ -1.91
RIM1YCR028C-A RSM22P36056 628 aa3.13□□□□□ -1.91
RIM1YCR028C-A VID24P38263 362 aa3.13□□□□□ -1.91
RIM1YCR028C-A IDP2P41939 412 aa3.13□□□□□ -1.91
RIM1YCR028C-A FYV8P46949 817 aaKnown RBP3.13□□□□□ -1.91
RIM1YCR028C-A GWT1P47026 490 aa3.13□□□□□ -1.91
RIM1YCR028C-A MAL13P53338 473 aa3.13□□□□□ -1.91
RIM1YCR028C-A BOR1P53838 576 aa3.13□□□□□ -1.91
RIM1YCR028C-A ALF1P53904 254 aa3.13□□□□□ -1.91
RIM1YCR028C-A TLG2Q08144 397 aa3.13□□□□□ -1.91
RIM1YCR028C-A KEL3Q08979 651 aaPredicted RBP3.13□□□□□ -1.91
RIM1YCR028C-A SSK22P25390 1331 aaPredicted RBP3.13□□□□□ -1.91
RIM1YCR028C-A RSF2P46974 1380 aa3.12□□□□□ -1.91
RIM1YCR028C-A CBS2P14905 389 aa3.12□□□□□ -1.91
RIM1YCR028C-A PHO13P19881 312 aa3.12□□□□□ -1.91
RIM1YCR028C-A GPI10P30777 616 aa3.12□□□□□ -1.91
RIM1YCR028C-A CMC1P36064 111 aa3.12□□□□□ -1.91
RIM1YCR028C-A TIF5P38431 405 aaKnown RBP3.12□□□□□ -1.91
RIM1YCR028C-A SYG1P40528 902 aa3.12□□□□□ -1.91
RIM1YCR028C-A URB2P47108 1174 aa3.12□□□□□ -1.91
RIM1YCR028C-A OCA1P50946 238 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms