RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeastyeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAR4YCL055W ATP11P32453 318 aa3.25□□□□□ -1.89
KAR4YCL055W MPE1P35728 441 aaKnown RBP3.25□□□□□ -1.89
KAR4YCL055W BYE1P36106 594 aa3.25□□□□□ -1.89
KAR4YCL055W RTT107P38850 1070 aa3.25□□□□□ -1.89
KAR4YCL055W LSM5P40089 93 aaKnown RBP3.25□□□□□ -1.89
KAR4YCL055W YMR147WP40218 223 aaKnown RBP3.25□□□□□ -1.89
KAR4YCL055W POP1P41812 875 aa3.25□□□□□ -1.89
KAR4YCL055W VTC2P43585 828 aa3.25□□□□□ -1.89
KAR4YCL055W OCA1P50946 238 aaPredicted RBP3.25□□□□□ -1.89
KAR4YCL055W RPM2Q02773 1202 aa3.25□□□□□ -1.89
KAR4YCL055W MRPL51Q06090 140 aaPredicted RBP3.25□□□□□ -1.89
KAR4YCL055W YDL009CQ12210 107 aa3.25□□□□□ -1.89
KAR4YCL055W LSP1Q12230 341 aaKnown RBP3.25□□□□□ -1.89
KAR4YCL055W RKM5Q12367 367 aa3.25□□□□□ -1.89
KAR4YCL055W PPH22P23595 377 aa3.24□□□□□ -1.89
KAR4YCL055W HXT3P32466 567 aaKnown RBP3.24□□□□□ -1.89
KAR4YCL055W NDC1P32500 655 aa3.24□□□□□ -1.89
KAR4YCL055W NFU1P32860 256 aa3.24□□□□□ -1.89
KAR4YCL055W PTR2P32901 601 aa3.24□□□□□ -1.89
KAR4YCL055W DED81P38707 554 aaKnown RBP3.24□□□□□ -1.89
KAR4YCL055W SYG1P40528 902 aa3.24□□□□□ -1.89
KAR4YCL055W VMA13P41807 478 aaKnown RBP3.24□□□□□ -1.89
KAR4YCL055W YGR149WP48236 432 aa3.24□□□□□ -1.89
KAR4YCL055W YGR250CP53316 781 aaKnown RBP3.24□□□□□ -1.89
KAR4YCL055W RPA49Q01080 415 aaPredicted RBP3.24□□□□□ -1.89
KAR4YCL055W YMR317WQ04893 1140 aa3.24□□□□□ -1.89
KAR4YCL055W VTA1Q06263 330 aa3.24□□□□□ -1.89
KAR4YCL055W TIP41Q12199 356 aa3.24□□□□□ -1.89
KAR4YCL055W RPO41P13433 1351 aaKnown RBP3.24□□□□□ -1.89
KAR4YCL055W RHO2P06781 192 aa3.23□□□□□ -1.89
KAR4YCL055W PHO2P07269 559 aa3.23□□□□□ -1.89
KAR4YCL055W YML002WP0CF17 737 aa3.23□□□□□ -1.89
KAR4YCL055W YCR022CP25620 114 aa3.23□□□□□ -1.89
KAR4YCL055W FUN19P28003 413 aaPredicted RBP3.23□□□□□ -1.89
KAR4YCL055W IDH2P28241 369 aaKnown RBP3.23□□□□□ -1.89
KAR4YCL055W ATS1P31386 333 aa3.23□□□□□ -1.89
KAR4YCL055W DLD2P46681 530 aaKnown RBP3.23□□□□□ -1.89
KAR4YCL055W MNP1P53163 194 aaPredicted RBP3.23□□□□□ -1.89
KAR4YCL055W CRZ1P53968 678 aa3.23□□□□□ -1.89
KAR4YCL055W IRC15Q02733 499 aa3.23□□□□□ -1.89
KAR4YCL055W HCR1Q05775 265 aaKnown RBP3.23□□□□□ -1.89
KAR4YCL055W KEL3Q08979 651 aaPredicted RBP3.23□□□□□ -1.89
KAR4YCL055W RRD2Q12461 358 aa3.23□□□□□ -1.89
KAR4YCL055W RPL15AP05748 204 aaKnown RBP3.22□□□□□ -1.89
KAR4YCL055W MTF1P14908 341 aaKnown RBP3.22□□□□□ -1.89
KAR4YCL055W ATP10P18496 279 aa3.22□□□□□ -1.89
KAR4YCL055W EXO70P19658 623 aa3.22□□□□□ -1.89
KAR4YCL055W BUB3P26449 341 aa3.22□□□□□ -1.89
KAR4YCL055W TUL1P36096 758 aa3.22□□□□□ -1.89
KAR4YCL055W THI2P38141 450 aa3.22□□□□□ -1.89
KAR4YCL055W RTT101P47050 842 aa3.22□□□□□ -1.89
KAR4YCL055W YGL260WP53056 76 aa3.22□□□□□ -1.89
KAR4YCL055W KTR5P53966 522 aaPredicted RBP3.22□□□□□ -1.89
KAR4YCL055W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
KAR4YCL055W SIL1Q08199 421 aa3.22□□□□□ -1.89
KAR4YCL055W SPT7P35177 1332 aa3.21□□□□□ -1.89
KAR4YCL055W SPS4P09937 338 aa3.21□□□□□ -1.9
KAR4YCL055W YIM1P28625 365 aa3.21□□□□□ -1.9
KAR4YCL055W SPC110P32380 944 aa3.21□□□□□ -1.9
KAR4YCL055W MFT1P33441 392 aaKnown RBP3.21□□□□□ -1.9
KAR4YCL055W HCS1P34243 683 aa3.21□□□□□ -1.9
KAR4YCL055W FMP46P36141 133 aaKnown RBP3.21□□□□□ -1.9
KAR4YCL055W MTC4P38335 694 aaKnown RBP3.21□□□□□ -1.9
KAR4YCL055W DHH1P39517 506 aaKnown RBP3.21□□□□□ -1.9
KAR4YCL055W SHO1P40073 367 aa3.21□□□□□ -1.9
KAR4YCL055W FAU1P40099 211 aa3.21□□□□□ -1.9
KAR4YCL055W RPR2P40571 144 aa3.21□□□□□ -1.9
KAR4YCL055W URB2P47108 1174 aa3.21□□□□□ -1.9
KAR4YCL055W ARX1Q03862 593 aaKnown RBP3.21□□□□□ -1.9
KAR4YCL055W VPS74Q06385 345 aa3.21□□□□□ -1.9
KAR4YCL055W FAS2P19097 1887 aaKnown RBP3.2□□□□□ -1.9
KAR4YCL055W LEU4P06208 619 aaKnown RBP3.2□□□□□ -1.9
KAR4YCL055W PRO3P32263 286 aaKnown RBP3.2□□□□□ -1.9
KAR4YCL055W RML2P32611 393 aa3.2□□□□□ -1.9
KAR4YCL055W CBP4P37267 147 aa3.2□□□□□ -1.9
KAR4YCL055W RPH1P39956 796 aa3.2□□□□□ -1.9
KAR4YCL055W ELP2P42935 788 aa3.2□□□□□ -1.9
KAR4YCL055W YFR016CP43597 1233 aaKnown RBP3.2□□□□□ -1.9
KAR4YCL055W GWT1P47026 490 aa3.2□□□□□ -1.9
KAR4YCL055W RMD9P53140 646 aaKnown RBP3.2□□□□□ -1.9
KAR4YCL055W RRP46P53256 223 aaPredicted RBP3.2□□□□□ -1.9
KAR4YCL055W GIR2Q03768 265 aaPredicted RBP3.2□□□□□ -1.9
KAR4YCL055W ERP1Q05359 219 aaKnown RBP3.2□□□□□ -1.9
KAR4YCL055W AYT1Q12226 474 aa3.2□□□□□ -1.9
KAR4YCL055W SET6Q12529 373 aa3.2□□□□□ -1.9
KAR4YCL055W HKR1P41809 1802 aa3.2□□□□□ -1.9
KAR4YCL055W DUR1,2P32528 1835 aaKnown RBP3.19□□□□□ -1.9
KAR4YCL055W RPL20AP0CX23 172 aaKnown RBP3.19□□□□□ -1.9
KAR4YCL055W RPL20BP0CX24 172 aaPredicted RBP3.19□□□□□ -1.9
KAR4YCL055W PDX1P16451 410 aa3.19□□□□□ -1.9
KAR4YCL055W CLC1P17891 233 aa3.19□□□□□ -1.9
KAR4YCL055W REC107P21651 314 aa3.19□□□□□ -1.9
KAR4YCL055W RPC53P25441 422 aa3.19□□□□□ -1.9
KAR4YCL055W YCR051WP25631 222 aa3.19□□□□□ -1.9
KAR4YCL055W HSP104P31539 908 aaKnown RBP3.19□□□□□ -1.9
KAR4YCL055W LOS1P33418 1100 aaPredicted RBP3.19□□□□□ -1.9
KAR4YCL055W NIP100P33420 868 aa3.19□□□□□ -1.9
KAR4YCL055W FRE2P36033 711 aa3.19□□□□□ -1.9
KAR4YCL055W SDS24P38314 527 aa3.19□□□□□ -1.9
KAR4YCL055W MDM31P38880 579 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms