RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YEL020CP39994 560 aa6.65□□□□□ -1.35
TDP1YBR223C LSM5P40089 93 aaKnown RBP6.65□□□□□ -1.35
TDP1YBR223C MPM1P40364 252 aa6.65□□□□□ -1.35
TDP1YBR223C PRM8P53174 237 aa6.65□□□□□ -1.35
TDP1YBR223C TWF1P53250 332 aa6.65□□□□□ -1.35
TDP1YBR223C ENA2Q01896 1091 aa6.65□□□□□ -1.35
TDP1YBR223C CCE1Q03702 353 aa6.65□□□□□ -1.35
TDP1YBR223C URC2Q04411 772 aa6.65□□□□□ -1.35
TDP1YBR223C MRX10Q05648 414 aa6.65□□□□□ -1.35
TDP1YBR223C VPS74Q06385 345 aa6.65□□□□□ -1.35
TDP1YBR223C MED2Q12124 431 aa6.65□□□□□ -1.35
TDP1YBR223C YLR126CQ12288 251 aa6.65□□□□□ -1.35
TDP1YBR223C ENA5Q12691 1091 aa6.65□□□□□ -1.35
TDP1YBR223C YPL119C-AQ3E751 87 aa6.65□□□□□ -1.35
TDP1YBR223C UBR1P19812 1950 aa6.65□□□□□ -1.35
TDP1YBR223C PUT2P07275 575 aa6.64□□□□□ -1.35
TDP1YBR223C EPT1P22140 391 aa6.64□□□□□ -1.35
TDP1YBR223C HCS1P34243 683 aa6.64□□□□□ -1.35
TDP1YBR223C AHP1P38013 176 aaKnown RBP6.64□□□□□ -1.35
TDP1YBR223C YBR071WP38243 211 aa6.64□□□□□ -1.35
TDP1YBR223C GIC1P38785 314 aa6.64□□□□□ -1.35
TDP1YBR223C YHR078WP38799 552 aa6.64□□□□□ -1.35
TDP1YBR223C SIT1P39980 628 aa6.64□□□□□ -1.35
TDP1YBR223C HEM14P40012 539 aa6.64□□□□□ -1.35
TDP1YBR223C TPA1P40032 644 aaKnown RBP6.64□□□□□ -1.35
TDP1YBR223C JHD1P40034 492 aa6.64□□□□□ -1.35
TDP1YBR223C SOK1P40317 901 aa6.64□□□□□ -1.35
TDP1YBR223C MET12P46151 657 aa6.64□□□□□ -1.35
TDP1YBR223C MPS2P53159 387 aa6.64□□□□□ -1.35
TDP1YBR223C NQM1P53228 333 aaPredicted RBP6.64□□□□□ -1.35
TDP1YBR223C YNL181WP53878 407 aa6.64□□□□□ -1.35
TDP1YBR223C GRX5Q02784 150 aa6.64□□□□□ -1.35
TDP1YBR223C HEH2Q03281 663 aa6.64□□□□□ -1.35
TDP1YBR223C ARX1Q03862 593 aaKnown RBP6.64□□□□□ -1.35
TDP1YBR223C RRP17Q04031 235 aaPredicted RBP6.64□□□□□ -1.35
TDP1YBR223C ORM2Q06144 216 aa6.64□□□□□ -1.35
TDP1YBR223C RRP15Q06511 250 aaPredicted RBP6.64□□□□□ -1.35
TDP1YBR223C NMD4Q12129 218 aa6.64□□□□□ -1.35
TDP1YBR223C PER33Q12144 273 aa6.64□□□□□ -1.35
TDP1YBR223C PST2Q12335 198 aaKnown RBP6.64□□□□□ -1.35
TDP1YBR223C CDC31P06704 161 aaKnown RBP6.63□□□□□ -1.35
TDP1YBR223C SWI5P08153 709 aa6.63□□□□□ -1.35
TDP1YBR223C HMG2P12684 1045 aa6.63□□□□□ -1.35
TDP1YBR223C RER1P25560 188 aa6.63□□□□□ -1.35
TDP1YBR223C CMK1P27466 446 aaKnown RBP6.63□□□□□ -1.35
TDP1YBR223C HXT4P32467 576 aa6.63□□□□□ -1.35
TDP1YBR223C CAT2P32796 670 aaKnown RBP6.63□□□□□ -1.35
TDP1YBR223C SOL2P37262 315 aa6.63□□□□□ -1.35
TDP1YBR223C ARN2P38724 620 aa6.63□□□□□ -1.35
TDP1YBR223C HXT6P39003 570 aaKnown RBP6.63□□□□□ -1.35
TDP1YBR223C HXT7P39004 570 aa6.63□□□□□ -1.35
TDP1YBR223C SPO73P40031 143 aa6.63□□□□□ -1.35
TDP1YBR223C YFL066CP43538 392 aa6.63□□□□□ -1.35
TDP1YBR223C CAK1P43568 368 aaPredicted RBP6.63□□□□□ -1.35
TDP1YBR223C ROM1P53046 1155 aa6.63□□□□□ -1.35
TDP1YBR223C SWC4P53201 476 aa6.63□□□□□ -1.35
TDP1YBR223C ATG38Q05789 226 aaKnown RBP6.63□□□□□ -1.35
TDP1YBR223C EMG1Q06287 252 aaKnown RBP6.63□□□□□ -1.35
TDP1YBR223C RRT8Q08219 342 aa6.63□□□□□ -1.35
TDP1YBR223C GSH2Q08220 491 aa6.63□□□□□ -1.35
TDP1YBR223C YGK3Q12222 375 aaPredicted RBP6.63□□□□□ -1.35
TDP1YBR223C GPR1Q12361 961 aa6.63□□□□□ -1.35
TDP1YBR223C LEU4P06208 619 aaKnown RBP6.62□□□□□ -1.35
TDP1YBR223C CLN2P20438 545 aa6.62□□□□□ -1.35
TDP1YBR223C RPN2P32565 945 aaKnown RBP6.62□□□□□ -1.35
TDP1YBR223C SPO23P33757 523 aa6.62□□□□□ -1.35
TDP1YBR223C YHR127WP38833 243 aaKnown RBP6.62□□□□□ -1.35
TDP1YBR223C AST2P39945 430 aaKnown RBP6.62□□□□□ -1.35
TDP1YBR223C IMD3P50095 523 aaKnown RBP6.62□□□□□ -1.35
TDP1YBR223C MUP1P50276 574 aa6.62□□□□□ -1.35
TDP1YBR223C NUP49Q02199 472 aa6.62□□□□□ -1.35
TDP1YBR223C SMA1Q02651 245 aa6.62□□□□□ -1.35
TDP1YBR223C GIP3Q03016 1276 aa6.62□□□□□ -1.35
TDP1YBR223C ARG7Q04728 441 aa6.62□□□□□ -1.35
TDP1YBR223C GAD1Q04792 585 aa6.62□□□□□ -1.35
TDP1YBR223C YMR034CQ05131 434 aaPredicted RBP6.62□□□□□ -1.35
TDP1YBR223C YLR345WQ06137 509 aa6.62□□□□□ -1.35
TDP1YBR223C CLP1Q08685 445 aaPredicted RBP6.62□□□□□ -1.35
TDP1YBR223C THP3Q12049 470 aaKnown RBP6.62□□□□□ -1.35
TDP1YBR223C RBD2Q12270 262 aa6.62□□□□□ -1.35
TDP1YBR223C DCP1Q12517 231 aaPredicted RBP6.62□□□□□ -1.35
TDP1YBR223C RDS2P19541 446 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C KGD1P20967 1014 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C RPL24BP24000 155 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C PRP19P32523 503 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C FMP23P38231 175 aa6.61□□□□□ -1.35
TDP1YBR223C YEL073CP39974 107 aa6.61□□□□□ -1.35
TDP1YBR223C DDI1P40087 428 aa6.61□□□□□ -1.35
TDP1YBR223C FMP10P40098 244 aa6.61□□□□□ -1.35
TDP1YBR223C IRC6P43615 237 aa6.61□□□□□ -1.35
TDP1YBR223C PMT4P46971 762 aa6.61□□□□□ -1.35
TDP1YBR223C RSM7P47150 247 aa6.61□□□□□ -1.35
TDP1YBR223C PYK2P52489 506 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C VEL1P53058 206 aa6.61□□□□□ -1.35
TDP1YBR223C IGO1P53897 168 aa6.61□□□□□ -1.35
TDP1YBR223C YPL071CQ02864 156 aa6.61□□□□□ -1.35
TDP1YBR223C YMD8Q03697 442 aa6.61□□□□□ -1.35
TDP1YBR223C NSE5Q03718 556 aa6.61□□□□□ -1.35
TDP1YBR223C RCN2Q12044 265 aa6.61□□□□□ -1.35
TDP1YBR223C ATG29Q12092 213 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms