RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C PHO89P38361 574 aa2.26□□□□□ -2.05
CLN3YAL040C SIC1P38634 284 aa2.26□□□□□ -2.05
CLN3YAL040C YHI9P38765 294 aa2.26□□□□□ -2.05
CLN3YAL040C YHR131CP38835 850 aa2.26□□□□□ -2.05
CLN3YAL040C YJL206CP39529 758 aa2.26□□□□□ -2.05
CLN3YAL040C ECM1P39715 212 aa2.26□□□□□ -2.05
CLN3YAL040C RTT105P40063 208 aa2.26□□□□□ -2.05
CLN3YAL040C VMA13P41807 478 aaKnown RBP2.26□□□□□ -2.05
CLN3YAL040C PXA1P41909 870 aa2.26□□□□□ -2.05
CLN3YAL040C PFA3P42836 336 aa2.26□□□□□ -2.05
CLN3YAL040C CCT7P42943 550 aaKnown RBP2.26□□□□□ -2.05
CLN3YAL040C ROK1P45818 564 aaPredicted RBP2.26□□□□□ -2.05
CLN3YAL040C TMA22P47089 198 aaPredicted RBP2.26□□□□□ -2.05
CLN3YAL040C LIA1P47120 325 aaKnown RBP2.26□□□□□ -2.05
CLN3YAL040C PAN2P53010 1115 aaPredicted RBP2.26□□□□□ -2.05
CLN3YAL040C BUD32P53323 261 aa2.26□□□□□ -2.05
CLN3YAL040C CSL4P53859 292 aaPredicted RBP2.26□□□□□ -2.05
CLN3YAL040C EOS1P53938 366 aa2.26□□□□□ -2.05
CLN3YAL040C LEE1Q02799 301 aaKnown RBP2.26□□□□□ -2.05
CLN3YAL040C YPL107WQ02873 248 aa2.26□□□□□ -2.05
CLN3YAL040C RSF1Q05043 376 aa2.26□□□□□ -2.05
CLN3YAL040C HOF1Q05080 669 aa2.26□□□□□ -2.05
CLN3YAL040C YPR117WQ06116 2489 aa2.26□□□□□ -2.05
CLN3YAL040C YLR177WQ06251 628 aa2.26□□□□□ -2.05
CLN3YAL040C YDL073WQ07454 984 aa2.26□□□□□ -2.05
CLN3YAL040C VAM6Q07468 1049 aa2.26□□□□□ -2.05
CLN3YAL040C OSW1Q08692 278 aa2.26□□□□□ -2.05
CLN3YAL040C YPQ1Q12010 308 aa2.26□□□□□ -2.05
CLN3YAL040C NFI1Q12216 726 aa2.26□□□□□ -2.05
CLN3YAL040C GPR1Q12361 961 aa2.26□□□□□ -2.05
CLN3YAL040C YNL162W-AQ3E7A8 72 aa2.26□□□□□ -2.05
CLN3YAL040C URA3P03962 267 aa2.25□□□□□ -2.05
CLN3YAL040C RAD3P06839 778 aa2.25□□□□□ -2.05
CLN3YAL040C ATP1P07251 545 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C TY2A-LR1P0C2J4 438 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-FP0CX61 438 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-GR2P0CX62 438 aa2.25□□□□□ -2.05
CLN3YAL040C GPA2P10823 449 aa2.25□□□□□ -2.05
CLN3YAL040C PMR1P13586 950 aa2.25□□□□□ -2.05
CLN3YAL040C CBS1P14066 229 aa2.25□□□□□ -2.05
CLN3YAL040C AMD1P15274 810 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C THR1P17423 357 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C MDH1P17505 334 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
CLN3YAL040C CLB3P24870 427 aa2.25□□□□□ -2.05
CLN3YAL040C SNT1P25357 1226 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-CP25383 438 aa2.25□□□□□ -2.05
CLN3YAL040C DAL80P26343 269 aa2.25□□□□□ -2.05
CLN3YAL040C BEM1P29366 551 aa2.25□□□□□ -2.05
CLN3YAL040C MVD1P32377 396 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C ARP2P32381 391 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C MTC7P32633 139 aa2.25□□□□□ -2.05
CLN3YAL040C STB6P36085 766 aa2.25□□□□□ -2.05
CLN3YAL040C ALY1P36117 915 aa2.25□□□□□ -2.05
CLN3YAL040C ECM13P38195 257 aa2.25□□□□□ -2.05
CLN3YAL040C HEK2P38199 381 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05 RIP-Chip
CLN3YAL040C KAP104P38217 918 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C YSW1P38280 609 aa2.25□□□□□ -2.05
CLN3YAL040C MED8P38304 223 aa2.25□□□□□ -2.05
CLN3YAL040C SFB3P38810 929 aa2.25□□□□□ -2.05
CLN3YAL040C JHD1P40034 492 aa2.25□□□□□ -2.05
CLN3YAL040C MET18P40469 1032 aa2.25□□□□□ -2.05
CLN3YAL040C CAB2P40506 365 aa2.25□□□□□ -2.05
CLN3YAL040C IST3P40565 148 aaPredicted RBP2.25□□□□□ -2.05
CLN3YAL040C TES1P41903 349 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C AAD10P47182 288 aa2.25□□□□□ -2.05
CLN3YAL040C TAF4P50105 388 aa2.25□□□□□ -2.05
CLN3YAL040C VAC7P53950 1165 aa2.25□□□□□ -2.05
CLN3YAL040C ERV25P54837 211 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C SLT2Q00772 484 aa2.25□□□□□ -2.05
CLN3YAL040C APM1Q00776 475 aaPredicted RBP2.25□□□□□ -2.05
CLN3YAL040C OAZ1Q02803 292 aa2.25□□□□□ -2.05
CLN3YAL040C FDC1Q03034 503 aa2.25□□□□□ -2.05
CLN3YAL040C TRS31Q03337 283 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-DR2Q03483 438 aa2.25□□□□□ -2.05
CLN3YAL040C CSN9Q03981 162 aa2.25□□□□□ -2.05
CLN3YAL040C PPN1Q04119 674 aa2.25□□□□□ -2.05
CLN3YAL040C RAD33Q04231 177 aa2.25□□□□□ -2.05
CLN3YAL040C DPB4Q04603 196 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C HEL2Q05580 639 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C CDC123Q05791 360 aa2.25□□□□□ -2.05
CLN3YAL040C FAR10Q06001 478 aa2.25□□□□□ -2.05
CLN3YAL040C BSP1Q06604 576 aa2.25□□□□□ -2.05
CLN3YAL040C ENT4Q07872 247 aa2.25□□□□□ -2.05
CLN3YAL040C CMS1Q07897 291 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C AAD15Q08361 143 aa2.25□□□□□ -2.05
CLN3YAL040C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05 RIP-Chip
CLN3YAL040C CHS5Q12114 671 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C HOS1Q12214 470 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-BQ12260 438 aa2.25□□□□□ -2.05
CLN3YAL040C COX17Q12287 69 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-OR2Q12293 438 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-DR1Q12392 438 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-OR1Q12439 438 aa2.25□□□□□ -2.05
CLN3YAL040C FRE6Q12473 712 aa2.25□□□□□ -2.05
CLN3YAL040C YOL159C-AQ3E769 90 aa2.25□□□□□ -2.05
CLN3YAL040C TY2A-DR3Q99303 438 aa2.25□□□□□ -2.05
CLN3YAL040C YLR302CO13544 120 aa2.25□□□□□ -2.05
CLN3YAL040C YPR089WO13585 888 aa2.25□□□□□ -2.05
CLN3YAL040C NSP1P14907 823 aaKnown RBP2.25□□□□□ -2.05
CLN3YAL040C CLN1P20437 546 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms