RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
SPIN3-219ENST00000639053 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
SPIN3-219ENST00000639053 CCDC34Q96HJ3 373 aa17.13■□□□□ 0.33
SPIN3-219ENST00000639053 HHIPL1Q96JK4 782 aa17.13■□□□□ 0.33
SPIN3-219ENST00000639053 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
SPIN3-219ENST00000639053 PORCNQ9H237 461 aa17.13■□□□□ 0.33
SPIN3-219ENST00000639053 MYCLP12524 364 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-219ENST00000639053 TPM4P67936 248 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 CNTN2Q02246 1040 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 CEP55Q53EZ4 464 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 PCNX4Q63HM2 1172 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 CYP4F22Q6NT55 531 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 PAXIP1Q6ZW49 1069 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-219ENST00000639053 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 ZIC5Q96T25 663 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 EFCC1Q9HA90 598 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 MORF4L1Q9UBU8 362 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 PFASO15067 1338 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 A0A087X0B3 334 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 IKBKBO14920 756 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 MSH4O15457 936 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
SPIN3-219ENST00000639053 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
SPIN3-219ENST00000639053 WDR78Q5VTH9 848 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 PDILTQ8N807 584 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 MXRA8Q9BRK3 442 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 MROH8Q9H579 483 aa17.12■□□□□ 0.33
SPIN3-219ENST00000639053 TTC12Q9H892 705 aaPredicted RBP17.12■□□□□ 0.33
SPIN3-219ENST00000639053 MEIS1O00470 390 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPIN3-219ENST00000639053 AOPEPQ8N6M6 819 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
SPIN3-219ENST00000639053 UBIAD1Q9Y5Z9 338 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SPIN3-219ENST00000639053 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 TBX3O15119 743 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 POLR2DO15514 142 aaKnown RBP17.1■□□□□ 0.33
SPIN3-219ENST00000639053 NR3C2P08235 984 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 ARP10275 920 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 ITGB5P18084 799 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 INHBEP58166 350 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 SLFN12Q8IYM2 578 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 MMP19Q99542 508 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
SPIN3-219ENST00000639053 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
SPIN3-219ENST00000639053 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 LCTP09848 1927 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 SOWAHBA6NEL2 793 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 POTEMA6NI47 508 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 CCND2P30279 289 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 TERF1P54274 439 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 CCNA1P78396 465 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 MDM2Q00987 491 aaPredicted RBP17.1■□□□□ 0.33
SPIN3-219ENST00000639053 TAF1CQ15572 869 aaPredicted RBP17.1■□□□□ 0.33
SPIN3-219ENST00000639053 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 TRIML1Q8N9V2 468 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 ERCC4Q92889 916 aaPredicted RBP17.1■□□□□ 0.33
SPIN3-219ENST00000639053 AK8Q96MA6 479 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 LRWD1Q9UFC0 647 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 CPA4Q9UI42 421 aa17.1■□□□□ 0.33
SPIN3-219ENST00000639053 PGK2P07205 417 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 UBA7P41226 1012 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 SREBF2Q12772 1141 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 KCTD2Q14681 263 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 FAM133AQ8N9E0 248 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 WDR11Q9BZH6 1224 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
SPIN3-219ENST00000639053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.33
SPIN3-219ENST00000639053 FCER1AP12319 257 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 TXLNAP40222 546 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 APLP1P51693 650 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.33
SPIN3-219ENST00000639053 PNOCQ13519 176 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 PDIA5Q14554 519 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 KARSQ15046 597 aaKnown RBP17.08■□□□□ 0.33
SPIN3-219ENST00000639053 POSTNQ15063 836 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 NIPA1Q7RTP0 329 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 CABP7Q86V35 215 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 DNERQ8NFT8 737 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 SLC5A5Q92911 643 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 DHX58Q96C10 678 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 MMTAG2Q9BU76 263 aaKnown RBP17.08■□□□□ 0.33
SPIN3-219ENST00000639053 CCSER1Q9C0I3 900 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 JADE2Q9NQC1 790 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.33
SPIN3-219ENST00000639053 ACTN4O43707 911 aaKnown RBP17.07■□□□□ 0.32
SPIN3-219ENST00000639053 TM4SF4P48230 202 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms