RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 SLC4A7Q9Y6M7 1214 aa8.48□□□□□ -1.05
CACNA1A-222ENST00000636022 PTPRSQ13332 1948 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 SH2B2O14492 632 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 SLC27A2O14975 620 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 PRC1O43663 620 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 PPFIA4O75335 1185 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 DDAH1O94760 285 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 ZNF286BP0CG31 522 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 TGFB3P10600 412 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 ATP2A2P16615 1042 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 UBA1P22314 1058 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 MCM5P33992 734 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 PSEN2P49810 448 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 CHMP4BP1P59074 171 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 MRPS9P82933 396 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 RBL2Q08999 1139 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 BFSP2Q13515 415 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 ADGRE1Q14246 886 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 NECTIN1Q15223 517 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 PTGISQ16647 500 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 HSDL1Q3SXM5 330 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 CELF3Q5SZQ8 465 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 KCNV1Q6PIU1 500 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 DEFB128Q7Z7B8 93 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 DHX37Q8IY37 1157 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 AFAP1L1Q8TED9 768 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 MYL10Q9BUA6 226 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 NKX2-4Q9H2Z4 354 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 BCAS3Q9H6U6 928 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 HDAC6Q9UBN7 1215 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 PCDHA11Q9Y5I1 949 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 DOCK5Q9H7D0 1870 aa8.47□□□□□ -1.05
CACNA1A-222ENST00000636022 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 PIK3CDO00329 1044 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 MEIS2O14770 477 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 GGPS1O95749 300 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 CXCL10P02778 98 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 MYOGP15173 224 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 CCND2P30279 289 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 ICAM3P32942 547 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 LIFRP42702 1097 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 HIC1Q14526 733 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 MFSD10Q14728 455 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 KIAA0753Q2KHM9 967 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 TRIM71Q2Q1W2 868 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 CREB3L3Q68CJ9 461 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 TRAF7Q6Q0C0 670 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 SKAP1Q86WV1 359 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 TMTC2Q8N394 836 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 SRBD1Q8N5C6 995 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 C7orf31Q8N865 590 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 CAGE1Q8TC20 777 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 PIBF1Q8WXW3 757 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 WNT8BQ93098 351 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 SPATA33Q96N06 139 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 INPP4AQ96PE3 977 aaPredicted RBP8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 LZTS2Q9BRK4 669 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 C16orf70Q9BSU1 422 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 ALG1Q9BT22 464 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 KATNAL1Q9BW62 490 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 SLC28A3Q9HAS3 691 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 NOD1Q9Y239 953 aa8.46□□□□□ -1.06
CACNA1A-222ENST00000636022 SPATA31C2B4DYI2 1134 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 RBAK-RBAKDNI3L0D1 243 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 SORBS3O60504 671 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 NBNO60934 754 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 STAM2O75886 525 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 PLEKHA8P1O95397 391 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 CKBP12277 381 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 ACTN1P12814 892 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 SELPP16109 830 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 HOXC8P31273 242 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 KIF5BP33176 963 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 ZNF200P98182 395 aaPredicted RBP8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 PTK7Q13308 1070 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 TCTN1Q2MV58 587 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 BMP2KLQ5H9B9 411 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 USP17L6PQ6QN14 398 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 LRRC8DQ7L1W4 858 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 HERC6Q8IVU3 1022 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 CMTR1Q8N1G2 835 aaKnown RBP8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 PHOSPHO2Q8TCD6 241 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 RRP36Q96EU6 259 aaKnown RBP8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 TMEM87BQ96K49 555 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 SLC9A7Q96T83 725 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 GAS2L1Q99501 681 aaPredicted RBP8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 FTOQ9C0B1 505 aaKnown RBP eCLIP8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
CACNA1A-222ENST00000636022 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms