RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 PPFIA4O75335 1185 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 TGFB3P10600 412 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 SELPP16109 830 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 ANTXR2P58335 489 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 CELF3Q5SZQ8 465 aaKnown RBP14.59□□□□□ -0.07
PTPN11-206ENST00000635652 LRRC8DQ7L1W4 858 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 MB21D2Q8IYB1 491 aaPredicted RBP14.59□□□□□ -0.07
PTPN11-206ENST00000635652 CTCFLQ8NI51 663 aaPredicted RBP14.59□□□□□ -0.07
PTPN11-206ENST00000635652 SYMPKQ92797 1274 aaKnown RBP14.59□□□□□ -0.07
PTPN11-206ENST00000635652 CTAGE1Q96RT6 745 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 SLC9A7Q96T83 725 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 MYL10Q9BUA6 226 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 PRDM6Q9NQX0 595 aa14.59□□□□□ -0.07
PTPN11-206ENST00000635652 PRRC2BQ5JSZ5 2229 aaKnown RBP14.58□□□□□ -0.07
PTPN11-206ENST00000635652 KIF28PB7ZC32 967 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 F2P00734 622 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 CA3P07451 260 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 CKBP12277 381 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 KIF5BP33176 963 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 SP2Q02086 613 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 HSDL1Q3SXM5 330 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 GNPTABQ3T906 1256 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 NFXL1Q6ZNB6 911 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 ZNF654Q8IZM8 581 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 PHOSPHO2Q8TCD6 241 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
PTPN11-206ENST00000635652 CERS4Q9HA82 394 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 LY9Q9HBG7 655 aa14.58□□□□□ -0.08
PTPN11-206ENST00000635652 HAS3O00219 553 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 PRC1O43663 620 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 BAIAP3O94812 1187 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 UBA1P22314 1058 aaKnown RBP14.57□□□□□ -0.08
PTPN11-206ENST00000635652 MCM5P33992 734 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 KCNJ6P48051 423 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 TJAP1Q5JTD0 557 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 HERC6Q8IVU3 1022 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 DHX38Q92620 1227 aaKnown RBP14.57□□□□□ -0.08
PTPN11-206ENST00000635652 GPKOWQ92917 476 aaPredicted RBP eCLIP14.57□□□□□ -0.08
PTPN11-206ENST00000635652 CUL5Q93034 780 aa14.57□□□□□ -0.08
PTPN11-206ENST00000635652 SEC63Q9UGP8 760 aaKnown RBP14.57□□□□□ -0.08
PTPN11-206ENST00000635652 CCDC69A6NI79 296 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 NOP56O00567 594 aaKnown RBP14.56□□□□□ -0.08
PTPN11-206ENST00000635652 DDAH1O94760 285 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 PARNO95453 639 aaKnown RBP14.56□□□□□ -0.08
PTPN11-206ENST00000635652 HOXD8P13378 290 aaPredicted RBP14.56□□□□□ -0.08
PTPN11-206ENST00000635652 MRPS9P82933 396 aaKnown RBP14.56□□□□□ -0.08
PTPN11-206ENST00000635652 ZNF200P98182 395 aaPredicted RBP14.56□□□□□ -0.08
PTPN11-206ENST00000635652 PTK7Q13308 1070 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 TMTC2Q8N394 836 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 SMARCC2Q8TAQ2 1214 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 ZBED2Q9BTP6 218 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 SPZ1Q9BXG8 430 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 RTEL1Q9NZ71 1219 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 THEGQ9P2T0 379 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 DOCK5Q9H7D0 1870 aa14.56□□□□□ -0.08
PTPN11-206ENST00000635652 KAT6AQ92794 2004 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 H3BRB1 525 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 RFXAPO00287 272 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 TLL1O43897 1013 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 STAM2O75886 525 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 GNAQP50148 359 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 GPNMBQ14956 572 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 CNKSR3Q6P9H4 555 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 USP17L6PQ6QN14 398 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 CMTR1Q8N1G2 835 aaKnown RBP14.55□□□□□ -0.08
PTPN11-206ENST00000635652 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
PTPN11-206ENST00000635652 ARNTL2Q8WYA1 636 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 TMEM87BQ96K49 555 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 LZTS2Q9BRK4 669 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 ESYT1Q9BSJ8 1104 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 C16orf70Q9BSU1 422 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 MTA3Q9BTC8 594 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 LSG1Q9H089 658 aaKnown RBP14.55□□□□□ -0.08
PTPN11-206ENST00000635652 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
PTPN11-206ENST00000635652 TUT1Q9H6E5 874 aaKnown RBP14.55□□□□□ -0.08
PTPN11-206ENST00000635652 BCAS3Q9H6U6 928 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 BDP1A6H8Y1 2624 aa14.55□□□□□ -0.08
PTPN11-206ENST00000635652 SPATA31C2B4DYI2 1134 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 SLC27A2O14975 620 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
PTPN11-206ENST00000635652 NBNO60934 754 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 PLEKHA8P1O95397 391 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 RXRAP19793 462 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 SMARCA1P28370 1054 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 THPOP40225 353 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 WDR5P61964 334 aaKnown RBP14.54□□□□□ -0.08
PTPN11-206ENST00000635652 TAP1Q03518 808 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 RBL2Q08999 1139 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 NEDD9Q14511 834 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 ZNF618Q5T7W0 954 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 CYFIP1Q7L576 1253 aa14.54□□□□□ -0.08
PTPN11-206ENST00000635652 TMCO2Q7Z6W1 182 aaPredicted RBP14.54□□□□□ -0.08
PTPN11-206ENST00000635652 PTPRSQ13332 1948 aa14.53□□□□□ -0.08
PTPN11-206ENST00000635652 FRMPD4Q14CM0 1322 aa14.53□□□□□ -0.08
PTPN11-206ENST00000635652 C17orf102A2RUQ5 167 aa14.53□□□□□ -0.08
PTPN11-206ENST00000635652 SH2B2O14492 632 aaPredicted RBP14.53□□□□□ -0.08
PTPN11-206ENST00000635652 FIBPO43427 364 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms