RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 CPXCR1Q8N123 301 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 ESR2Q92731 530 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 PAWRQ96IZ0 340 aaKnown RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 ZSCAN10Q96SZ4 725 aaPredicted RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 ZNF395Q9H8N7 513 aaPredicted RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 COL20A1Q9P218 1284 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 DDX20Q9UHI6 824 aaKnown RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 NR2E3Q9Y5X4 410 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 WDR19Q8NEZ3 1342 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.98
TCF4-260ENST00000627685 MYADML2A6NDP7 307 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 FIGNL2A6NMB9 653 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 H0YGN5 161 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 SLC27A2O14975 620 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 SEPT4O43236 478 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 WFS1O76024 890 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 GOLGA8HP0CJ92 632 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 NKX3-2P78367 333 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 GHRHRQ02643 423 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 SNX17Q15036 470 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.98
TCF4-260ENST00000627685 HABP4Q5JVS0 413 aaKnown RBP8.96□□□□□ -0.98
TCF4-260ENST00000627685 WDR78Q5VTH9 848 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 SLC30A10Q6XR72 485 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 DPP9Q86TI2 863 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 CHST13Q8NET6 341 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 IGDCC4Q8TDY8 1250 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 DPF3Q92784 378 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 KCNB2Q92953 911 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 TINF2Q9BSI4 451 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 RNF41Q9H4P4 317 aaPredicted RBP8.96□□□□□ -0.98
TCF4-260ENST00000627685 RNF146Q9NTX7 359 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 CYP39A1Q9NYL5 469 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 NXF1Q9UBU9 619 aaKnown RBP8.96□□□□□ -0.98
TCF4-260ENST00000627685 NRBP1Q9UHY1 535 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 MAD2L2Q9UI95 211 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 PCDHB11Q9Y5F2 797 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 SYNGAP1Q96PV0 1343 aa8.96□□□□□ -0.98
TCF4-260ENST00000627685 TTLL8A6PVC2 850 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 SPINT1O43278 529 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 RAD21O60216 631 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 ADH1AP07327 375 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 EDNRBP24530 442 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 NFX1Q12986 1120 aaKnown RBP8.95□□□□□ -0.98
TCF4-260ENST00000627685 LRRC26Q2I0M4 334 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 ANO1Q5XXA6 986 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 JMJD4Q9H9V9 463 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 LY9Q9HBG7 655 aa8.95□□□□□ -0.98
TCF4-260ENST00000627685 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
TCF4-260ENST00000627685 ZBED4O75132 1171 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 KCTD2Q14681 263 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 GRM4Q14833 912 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CCDC96Q2M329 555 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 ADCK5Q3MIX3 580 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CREB3L3Q68CJ9 461 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 TAPT1Q6NXT6 567 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CCDC174Q6PII3 467 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CHST3Q7LGC8 479 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CCDC144CPQ8IYA2 1237 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 MSL3Q8N5Y2 521 aaKnown RBP8.94□□□□□ -0.98
TCF4-260ENST00000627685 KLHDC9Q8NEP7 349 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CHURC1Q8WUH1 139 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 TBC1D5Q92609 795 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 INSM2Q96T92 566 aaPredicted RBP8.94□□□□□ -0.98
TCF4-260ENST00000627685 UBA5Q9GZZ9 404 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 C11orf49Q9H6J7 331 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 ACAD9Q9H845 621 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 HOMER2Q9NSB8 354 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 CTNNA3Q9UI47 895 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 DNMT3LQ9UJW3 386 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 MTMR7Q9Y216 660 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 SYNRGQ9UMZ2 1314 aa8.94□□□□□ -0.98
TCF4-260ENST00000627685 SMCHD1A6NHR9 2005 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 A0A1W2PPC1 479 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 DNM1LO00429 736 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 SH2B2O14492 632 aaPredicted RBP8.93□□□□□ -0.98
TCF4-260ENST00000627685 ALAS1P13196 640 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 LRRC41Q15345 812 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 QRICH1Q2TAL8 776 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 TKFCQ3LXA3 575 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 ASPRV1Q53RT3 343 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 GPATCH4Q5T3I0 446 aaKnown RBP8.93□□□□□ -0.98
TCF4-260ENST00000627685 ARMCX2Q7L311 632 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 ADGRF4Q8IZF3 695 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 RUFY2Q8WXA3 655 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 TRERF1Q96PN7 1200 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 KRT23Q9C075 422 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 UPF3AQ9H1J1 476 aaKnown RBP8.93□□□□□ -0.98
TCF4-260ENST00000627685 RIOX1Q9H6W3 641 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 CNNM2Q9H8M5 875 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
TCF4-260ENST00000627685 FBXO40Q9UH90 709 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 CCPG1Q9ULG6 757 aa8.93□□□□□ -0.98
TCF4-260ENST00000627685 GNEQ9Y223 722 aaKnown RBP8.93□□□□□ -0.98
TCF4-260ENST00000627685 TRIOBPQ9H2D6 2365 aa8.92□□□□□ -0.98
TCF4-260ENST00000627685 NID2Q14112 1375 aa8.92□□□□□ -0.98
TCF4-260ENST00000627685 FRMPD4Q14CM0 1322 aa8.92□□□□□ -0.98
TCF4-260ENST00000627685 RBAK-RBAKDNI3L0D1 243 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms