RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 ELNP15502 786 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 CYP2C19P33261 490 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 MCM7P33993 719 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 TRAPPC10P48553 1259 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 TOB1P50616 345 aaPredicted RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 ZNF174Q15697 407 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 CEP55Q53EZ4 464 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 PRR16Q569H4 304 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 FBXO16Q8IX29 292 aaPredicted RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 TRMT44Q8IYL2 757 aaKnown RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 CYP2W1Q8TAV3 490 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 MORC4Q8TE76 937 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 TRIB2Q92519 343 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 NAP1L4Q99733 375 aaKnown RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 MXRA8Q9BRK3 442 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 ZHX1Q9UKY1 873 aaPredicted RBP9.67□□□□□ -0.86
SGMS1-211ENST00000626236 PCDHB6Q9Y5E3 794 aa9.67□□□□□ -0.86
SGMS1-211ENST00000626236 CYP3A7-CYP3A51PA0A087WV96 503 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 SLC37A4O43826 429 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 STAM2O75886 525 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 GCFC2P16383 781 aaKnown RBP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 ITGB5P18084 799 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 NCLP19338 710 aaKnown RBP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 CYP3A7P24462 503 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 CIITAP33076 1130 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 CEBPZQ03701 1054 aaKnown RBP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 DNM1Q05193 864 aaKnown RBP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 MTMR1Q13613 665 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 GNPTABQ3T906 1256 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 Q4G0T1 1027 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 MFSD14CQ5VZR4 134 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 PPP4R3AQ6IN85 833 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 MOXD1Q6UVY6 613 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 SEPT14Q6ZU15 432 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 NLRX1Q86UT6 975 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 PLA2G4DQ86XP0 818 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 MFRPQ9BY79 579 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 WDR11Q9BZH6 1224 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 FTOQ9C0B1 505 aaKnown RBP eCLIP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 VTA1Q9NP79 307 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 JADE2Q9NQC1 790 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 DDX25Q9UHL0 483 aaKnown RBP9.66□□□□□ -0.86
SGMS1-211ENST00000626236 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 UBIAD1Q9Y5Z9 338 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 PTCH2Q9Y6C5 1203 aa9.66□□□□□ -0.86
SGMS1-211ENST00000626236 IGLV3-22A0A075B6J6 115 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 MEIS1O00470 390 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 NEMFO60524 1076 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 RGS20O76081 388 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 HMGCRP04035 888 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 ARP10275 920 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 SETQ01105 290 aaPredicted RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 TRIM32Q13049 653 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 ACVR2BQ13705 512 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 SF3A1Q15459 793 aaKnown RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 PRAMEF19Q5SWL8 479 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 ANO1Q5XXA6 986 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 NIPA1Q7RTP0 329 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 CTU1Q7Z7A3 348 aaKnown RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 SLAIN1Q8ND83 568 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 LENG9Q96B70 501 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 GPRASP2Q96D09 838 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 MBOAT7Q96N66 472 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 INPP4AQ96PE3 977 aaPredicted RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 UIMC1Q96RL1 719 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 USP28Q96RU2 1077 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 KATNBL1Q9H079 304 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 ABHD16BQ9H3Z7 469 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 PKD2L1Q9P0L9 805 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
SGMS1-211ENST00000626236 CLIC4Q9Y696 253 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 MRVI1Q9Y6F6 885 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 FRMPD3Q5JV73 1810 aa9.65□□□□□ -0.86
SGMS1-211ENST00000626236 HTTP42858 3142 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 MSH4O15457 936 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 FIBPO43427 364 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 MARCH6O60337 910 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 IGHA2P01877 340 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 GRK4P32298 578 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 KRT85P78386 507 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 CACNB2Q08289 660 aaPredicted RBP9.64□□□□□ -0.87
SGMS1-211ENST00000626236 PTGDRQ13258 359 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 SEMA3FQ13275 785 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 ORC2Q13416 577 aaPredicted RBP9.64□□□□□ -0.87
SGMS1-211ENST00000626236 CALCRLQ16602 461 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 IER5LQ5T953 404 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 TAPT1Q6NXT6 567 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 GJA10Q969M2 543 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 CDHR1Q96JP9 859 aa9.64□□□□□ -0.87
SGMS1-211ENST00000626236 ZNF577Q9BSK1 485 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms