RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 WTAPQ15007 396 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 PGM5Q15124 567 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 KIAA0753Q2KHM9 967 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 HERC6Q8IVU3 1022 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 MICALL1Q8N3F8 863 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 C7orf31Q8N865 590 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 PPTC7Q8NI37 304 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 CAGE1Q8TC20 777 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 PHOSPHO2Q8TCD6 241 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
TARDBP-221ENST00000619555 SLC9A7Q96T83 725 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
TARDBP-221ENST00000619555 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 TRANK1O15050 2925 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 EPOPA6NHQ4 379 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 HAS3O00219 553 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 NBNO60934 754 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 GGPS1O95749 300 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 F2P00734 622 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 CKBP12277 381 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-221ENST00000619555 HIC1Q14526 733 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 TCTN1Q2MV58 587 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 HSDL1Q3SXM5 330 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
TARDBP-221ENST00000619555 LRRC8DQ7L1W4 858 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 TMCO2Q7Z6W1 182 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-221ENST00000619555 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
TARDBP-221ENST00000619555 SAMD3Q8N6K7 520 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 IGDCC4Q8TDY8 1250 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 ATXN2LQ8WWM7 1075 aaKnown RBP12.93□□□□□ -0.34
TARDBP-221ENST00000619555 WNT8BQ93098 351 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
TARDBP-221ENST00000619555 REV3LO60673 3130 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 PPFIA4O75335 1185 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 UBA1P22314 1058 aaKnown RBP12.92□□□□□ -0.34
TARDBP-221ENST00000619555 CCND2P30279 289 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 TAP1Q03518 808 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 RBL2Q08999 1139 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 SART3Q15020 963 aaKnown RBP12.92□□□□□ -0.34
TARDBP-221ENST00000619555 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
TARDBP-221ENST00000619555 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 SPRED2Q7Z698 418 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-221ENST00000619555 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 MAP4K1Q92918 833 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 KATNAL1Q9BW62 490 aa12.92□□□□□ -0.34
TARDBP-221ENST00000619555 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
TARDBP-221ENST00000619555 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 CXCL10P02778 98 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 KCNJ6P48051 423 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
TARDBP-221ENST00000619555 DEFB103AP81534 67 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 MRPS5P82675 430 aaKnown RBP12.91□□□□□ -0.34
TARDBP-221ENST00000619555 MRPS9P82933 396 aaKnown RBP12.91□□□□□ -0.34
TARDBP-221ENST00000619555 TRAF1Q13077 416 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 PTK7Q13308 1070 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 ZNF618Q5T7W0 954 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 KRT40Q6A162 431 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 C16orf70Q9BSU1 422 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 MLXIPQ9HAP2 919 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
TARDBP-221ENST00000619555 MTCH2Q9Y6C9 303 aa12.91□□□□□ -0.34
TARDBP-221ENST00000619555 LCHNA4D1U4 455 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 TLL1O43897 1013 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 TGFB3P10600 412 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 COL9A3Q14050 684 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-221ENST00000619555 MBTPS1Q14703 1052 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 CNKSR3Q6P9H4 555 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 RTEL1Q9NZ71 1219 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 DOCK5Q9H7D0 1870 aa12.9□□□□□ -0.34
TARDBP-221ENST00000619555 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
TARDBP-221ENST00000619555 GTPBP6O43824 516 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-221ENST00000619555 PARNO95453 639 aaKnown RBP12.89□□□□□ -0.35
TARDBP-221ENST00000619555 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-221ENST00000619555 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
TARDBP-221ENST00000619555 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
TARDBP-221ENST00000619555 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
TARDBP-221ENST00000619555 ADAMTS19Q8TE59 1207 aa12.89□□□□□ -0.35
TARDBP-221ENST00000619555 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
TARDBP-221ENST00000619555 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-221ENST00000619555 TELO2Q9Y4R8 837 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms