RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 USP17L12C9JPN9 530 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 USP17L21D6R901 530 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 HOXA7P31268 230 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 EPHB1P54762 984 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PDE1BQ01064 536 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 TMEM164Q5U3C3 297 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 RPAP2Q8IXW5 612 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 SPDYE1Q8NFV5 336 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 TAF4BQ92750 862 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 SLF1Q9BQI6 1058 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 SUGT1Q9Y2Z0 365 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 FRMPD3Q5JV73 1810 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PAPPA2Q9BXP8 1791 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 GRK4P32298 578 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PRR23BQ6ZRT6 265 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ZSCAN18Q8TBC5 510 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 INCENPQ9NQS7 918 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 EXOC1Q9NV70 894 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PCDHB6Q9Y5E3 794 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 RRP8O43159 456 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 PFKPQ01813 784 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 E2F4Q16254 413 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 RAB3IPQ96QF0 476 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 SENP6Q9GZR1 1112 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 WDR46O15213 610 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 KARSQ15046 597 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 GMCL1Q96IK5 515 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 LRP6O75581 1613 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 RASGRP1O95267 797 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 RALAP11233 206 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 KRT2P35908 639 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 RPS8P62241 208 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 TDRD12Q587J7 1177 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 C4orf50Q6ZRC1 276 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 CCDC149Q6ZUS6 474 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 NPC1L1Q9UHC9 1359 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 EIF3JO75822 258 aaKnown RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 MCM5P33992 734 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ASPRV1Q53RT3 343 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 FBXO46Q6PJ61 603 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 MFSD14AQ96MC6 490 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 FAM205AQ6ZU69 1335 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PLSCR1O15162 318 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 TREHO43280 583 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 VCLP18206 1134 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 CACNB1Q02641 598 aaPredicted RBP3.69□□□□□ -1.82
LPP-220ENST00000617246 SV2BQ7L1I2 683 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 THEGQ9P2T0 379 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 PI4KBQ9UBF8 816 aa3.69□□□□□ -1.82
LPP-220ENST00000617246 ADCY3O60266 1144 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PSAPP07602 524 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 SOX10P56693 466 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 DAB2IPQ5VWQ8 1189 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 SENP2Q9HC62 589 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PHIPQ8WWQ0 1821 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CCER2I3L3R5 266 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PHKG2P15735 406 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 RSPH1Q8WYR4 309 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 NUCKS1Q9H1E3 243 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 AATFQ9NY61 560 aaKnown RBP eCLIP3.68□□□□□ -1.82
LPP-220ENST00000617246 PHKA2P46019 1235 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.68□□□□□ -1.82
LPP-220ENST00000617246 RAB27AP51159 221 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 TTC39CQ8N584 583 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 GBP3Q9H0R5 595 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 TNS1Q9HBL0 1735 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 TTLL13PA6NNM8 815 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ATG13O75143 517 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 KRT38O76015 456 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 HIRAP54198 1017 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 IFT81Q8WYA0 676 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 HVCN1Q96D96 273 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CNPPD1Q9BV87 410 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 SAGE1Q9NXZ1 904 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CDV3Q9UKY7 258 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 SPACA6W5XKT8 324 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 PRAG1Q86YV5 1406 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 STAT6P42226 847 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 IRX4P78413 519 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ASPHQ12797 758 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 TRIP10Q15642 601 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 TFB1MQ8WVM0 346 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 POLMQ9NP87 494 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 NLRC4Q9NPP4 1024 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 NRLP54845 237 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ARPP19P56211 112 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 ARSJQ5FYB0 599 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 ANKS3Q6ZW76 656 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 MYOCDQ8IZQ8 938 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 FAM177A1Q8N128 213 aaPredicted RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 DCLK3Q9C098 648 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CHPF2Q9P2E5 772 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 STRIP2Q9ULQ0 834 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 CD163L1Q9NR16 1453 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 MED23Q9ULK4 1368 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 USP8P40818 1118 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 DDX53Q86TM3 631 aaKnown RBP3.68□□□□□ -1.82
LPP-220ENST00000617246 JRKLQ9Y4A0 524 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 GAS7O60861 476 aa3.68□□□□□ -1.82
LPP-220ENST00000617246 BRPF1P55201 1214 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms