RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 GNPATO15228 680 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 PAFAH1B1P43034 410 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 SEPT2Q15019 361 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 CCDC181Q5TID7 509 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 FAM76AQ8TAV0 307 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 NUCKS1Q9H1E3 243 aaKnown RBP16.21■□□□□ 0.19
CTCFL-219ENST00000608720 TSKSQ9UJT2 592 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 CEP83Q9Y592 693 aa16.21■□□□□ 0.19
CTCFL-219ENST00000608720 EHHADHQ08426 723 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.18
CTCFL-219ENST00000608720 ASTE1Q2TB18 679 aaPredicted RBP16.21■□□□□ 0.18
CTCFL-219ENST00000608720 TMEM119Q4V9L6 283 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 CACNA2D4Q7Z3S7 1137 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 DDX12PQ92771 950 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 NOX5Q96PH1 765 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 DONSONQ9NYP3 566 aa16.21■□□□□ 0.18
CTCFL-219ENST00000608720 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.18
CTCFL-219ENST00000608720 SLC37A4O43826 429 aa16.2■□□□□ 0.18
CTCFL-219ENST00000608720 SHOX2O60902 331 aaPredicted RBP16.2■□□□□ 0.18
CTCFL-219ENST00000608720 ASPRV1Q53RT3 343 aa16.2■□□□□ 0.18
CTCFL-219ENST00000608720 SND1Q7KZF4 910 aaKnown RBP eCLIP16.2■□□□□ 0.18
CTCFL-219ENST00000608720 SLF2Q8IX21 1173 aa16.2■□□□□ 0.18
CTCFL-219ENST00000608720 RIN2Q8WYP3 895 aaPredicted RBP16.2■□□□□ 0.18
CTCFL-219ENST00000608720 SYN2Q92777 582 aaPredicted RBP16.2■□□□□ 0.18
CTCFL-219ENST00000608720 FAM163AQ96GL9 167 aaPredicted RBP16.2■□□□□ 0.18
CTCFL-219ENST00000608720 CXorf56Q9H5V9 222 aa16.2■□□□□ 0.18
CTCFL-219ENST00000608720 RNF14Q9UBS8 474 aa16.2■□□□□ 0.18
CTCFL-219ENST00000608720 TDP2O95551 362 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 PDHBP11177 359 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 FKBP3Q00688 224 aaKnown RBP16.19■□□□□ 0.18
CTCFL-219ENST00000608720 GLE1Q53GS7 698 aaKnown RBP16.19■□□□□ 0.18
CTCFL-219ENST00000608720 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 DMGDHQ9UI17 866 aaKnown RBP16.19■□□□□ 0.18
CTCFL-219ENST00000608720 GOLGA6CA6NDK9 693 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 RBAK-RBAKDNI3L0D1 243 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 EDIL3O43854 480 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 GOLGA6DP0CG33 693 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 TNFRSF8P28908 595 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 EPHB4P54760 987 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 NFIXQ14938 502 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 PPP4R3AQ6IN85 833 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 EMBQ6PCB8 327 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 HDAC7Q8WUI4 952 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
CTCFL-219ENST00000608720 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 CD209Q9NNX6 404 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 LUC7LQ9NQ29 371 aaKnown RBP16.19■□□□□ 0.18
CTCFL-219ENST00000608720 GOLGA6AQ9NYA3 693 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 COL4A3BPQ9Y5P4 624 aa16.19■□□□□ 0.18
CTCFL-219ENST00000608720 GOLGA8KD6RF30 607 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 OPA1O60313 960 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 EZH2Q15910 746 aaKnown RBP16.18■□□□□ 0.18
CTCFL-219ENST00000608720 SLC9C1Q4G0N8 1177 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 ALS2CLQ60I27 953 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 PPP1R18Q6NYC8 613 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 COA7Q96BR5 231 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 CEP72Q9P209 647 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 STIM2Q9P246 746 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 POTEMA6NI47 508 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTCFL-219ENST00000608720 RHBDL3P58872 404 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 RASSF7Q02833 373 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
CTCFL-219ENST00000608720 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 HGSNATQ68CP4 663 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 TLR10Q9BXR5 811 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 A1CFQ9NQ94 594 aaKnown RBP16.18■□□□□ 0.18
CTCFL-219ENST00000608720 BMP2KQ9NSY1 1161 aaPredicted RBP16.18■□□□□ 0.18
CTCFL-219ENST00000608720 COL24A1Q17RW2 1714 aa16.18■□□□□ 0.18
CTCFL-219ENST00000608720 FRMPD2Q68DX3 1309 aaPredicted RBP16.17■□□□□ 0.18
CTCFL-219ENST00000608720 GNA14O95837 355 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 SERPING1P05155 500 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 IL1R1P14778 569 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 PPFIA1Q13136 1202 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
CTCFL-219ENST00000608720 LRRC41Q15345 812 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 CFAP221Q4G0U5 840 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 ZCWPW2Q504Y3 356 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 KLHDC7AQ5VTJ3 777 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 SFMBT2Q5VUG0 894 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 GBP6Q6ZN66 633 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 ILDR2Q71H61 639 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 CAVIN3Q969G5 261 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 CEP63Q96MT8 703 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 SH3GL2Q99962 352 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 MTMR4Q9NYA4 1195 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 SALL4Q9UJQ4 1053 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 ATXN2Q99700 1313 aaKnown RBP16.17■□□□□ 0.18
CTCFL-219ENST00000608720 ERLIN2O94905 339 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 ATP2B4P23634 1241 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 COASYQ13057 564 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 NNTQ13423 1086 aa16.17■□□□□ 0.18
CTCFL-219ENST00000608720 CCDC40Q4G0X9 1142 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms