RNA–Protein interactions for RNA: ENST00000605569.1

NDE1P2-201, Transcript of nudE neurodevelopment protein 1 pseudogene 2, humanhuman

BASIC

Gene NDE1P2, Length 1,105 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1P2-201ENST00000605569 DEFB118Q96PH6 123 aa10.94□□□□□ -0.66
NDE1P2-201ENST00000605569 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
NDE1P2-201ENST00000605569 GZF1Q9H116 711 aaPredicted RBP10.94□□□□□ -0.66
NDE1P2-201ENST00000605569 KANSL2Q9H9L4 492 aa10.94□□□□□ -0.66
NDE1P2-201ENST00000605569 CEP290O15078 2479 aa10.94□□□□□ -0.66
NDE1P2-201ENST00000605569 A0A0G2JMZ2 1700 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 H3BM21 787 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 TERTO14746 1132 aaKnown RBP10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 FLOT1O75955 427 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 HMGCRP04035 888 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 PPARAQ07869 468 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 COG2Q14746 738 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 LRRFIP1Q32MZ4 808 aaKnown RBP10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 FAM26DQ5JW98 314 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 WDR78Q5VTH9 848 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 ALKBH2Q6NS38 261 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 UBE2Q1Q7Z7E8 422 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 LPAR1Q92633 364 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 NAPBQ9H115 298 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 PAK6Q9NQU5 681 aaPredicted RBP10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 FLRT1Q9NZU1 646 aa10.93□□□□□ -0.66
NDE1P2-201ENST00000605569 ZBTB39O15060 712 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 WDR46O15213 610 aaKnown RBP10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 SGPL1O95470 568 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 FAM83BQ5T0W9 1011 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 MAP3K21Q5TCX8 1036 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 CCAR1Q8IX12 1150 aaKnown RBP10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 NPLOC4Q8TAT6 608 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 SOCS4Q8WXH5 440 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 TRERF1Q96PN7 1200 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 SPATC1LQ9H0A9 340 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
NDE1P2-201ENST00000605569 COL11A1P12107 1806 aaPredicted RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 NDUFB10O96000 172 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 FAM157BP0CG42 384 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 ERCC3P19447 782 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 RGS2P41220 211 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 EIF1AXP47813 144 aaKnown RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 IDH3AP50213 366 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 CCNA1P78396 465 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 CACNB2Q08289 660 aaPredicted RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 PLS1Q14651 629 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 TMEM132BQ14DG7 1078 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 ZNF444Q8N0Y2 327 aaPredicted RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 DIS3LQ8TF46 1054 aaKnown RBP10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 RILPL2Q969X0 211 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 APBA2Q99767 749 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 NACAP1Q9BZK3 213 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 MTMR4Q9NYA4 1195 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 NYAP2Q9P242 653 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 MYH4Q9Y623 1939 aa10.91□□□□□ -0.66
NDE1P2-201ENST00000605569 SLC15A5A6NIM6 579 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 F5H6K3 240 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 OPLAHO14841 1288 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 BNIP3LO60238 219 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 NMT2O60551 498 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 COBLO75128 1261 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 FARP2O94887 1054 aaPredicted RBP10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 ZKSCAN1P17029 563 aaPredicted RBP10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 CCND3P30281 292 aaPredicted RBP10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 TFAP4Q01664 338 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 TNP2Q05952 138 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 TYRO3Q06418 890 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 KLRC3Q07444 240 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 GRB14Q14449 540 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 ECM1Q16610 540 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 RASGRP2Q7LDG7 609 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 REPS2Q8NFH8 660 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 NEDD1Q8NHV4 660 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 CWC22Q9HCG8 908 aaKnown RBP10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 HELLSQ9NRZ9 838 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 ADAMTS5Q9UNA0 930 aa10.9□□□□□ -0.66
NDE1P2-201ENST00000605569 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.67
NDE1P2-201ENST00000605569 RPTORQ8N122 1335 aa10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 VWA5AO00534 786 aa10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 KHNYNO15037 678 aaKnown RBP10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 FGAP02671 866 aa10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 HSPD1P10809 573 aaKnown RBP10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 SDSP20132 328 aa10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 ADORA2AP29274 412 aa10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 CYP2C19P33261 490 aa10.89□□□□□ -0.67
NDE1P2-201ENST00000605569 ARSDP51689 593 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms