RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PCNX4Q63HM2 1172 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 KRBA2Q6ZNG9 492 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 WDR11Q9BZH6 1224 aa19.54■□□□□ 0.72
PPFIA3-207ENST00000602716 PGK2P07205 417 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 PRR29P0C7W0 189 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 YY1P25490 414 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 ZRSR1Q15695 479 aaKnown RBP19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 WDR78Q5VTH9 848 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 MXRA8Q9BRK3 442 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 PKD2L1Q9P0L9 805 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 VAV3Q9UKW4 847 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 UBIAD1Q9Y5Z9 338 aa19.53■□□□□ 0.72
PPFIA3-207ENST00000602716 MEIS1O00470 390 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 FGD4Q96M96 766 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 PARK7Q99497 189 aaKnown RBP19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 FBXO40Q9UH90 709 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 ADGRA2Q96PE1 1338 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 SOWAHBA6NEL2 793 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 MANSC4A6NHS7 340 aaPredicted RBP19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 MARCH6O60337 910 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 SLC25A27O95847 323 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 NOLC1Q14978 699 aaKnown RBP eCLIP19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 NAALADL2Q58DX5 795 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 CYP4F22Q6NT55 531 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 CABP7Q86V35 215 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 SDF4Q9BRK5 362 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 PDCL3Q9H2J4 239 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 SPTLC3Q9NUV7 552 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 LRWD1Q9UFC0 647 aa19.52■□□□□ 0.72
PPFIA3-207ENST00000602716 NR3C2P08235 984 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 CASP1P29466 404 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PLCB2Q00722 1185 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PNOCQ13519 176 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 TMEM266Q2M3C6 531 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 CNNM3Q8NE01 707 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 GPRC5AQ8NFJ5 357 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 STAMQ92783 540 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 DISC1Q9NRI5 854 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 MORF4L1Q9UBU8 362 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PCDHA12Q9UN75 941 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PFASO15067 1338 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 DYNC1I1O14576 645 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 RGS20O76081 388 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 ECM1Q16610 540 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PDXDC2PQ6P474 469 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PAXIP1Q6ZW49 1069 aaPredicted RBP19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 AK8Q96MA6 479 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 TIGD1Q96MW7 591 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 PNMA5Q96PV4 448 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 MTRQ99707 1265 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 CCSER1Q9C0I3 900 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 CPA4Q9UI42 421 aa19.51■□□□□ 0.71
PPFIA3-207ENST00000602716 TBX3O15119 743 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 TPM3P06753 285 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 PLCG1P19174 1290 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 UBA7P41226 1012 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 SEMA3FQ13275 785 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 GRB10Q13322 594 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 FAM133AQ8N9E0 248 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 NSUN6Q8TEA1 469 aaKnown RBP19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 GTF3C2Q8WUA4 911 aaPredicted RBP19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 SLC5A5Q92911 643 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 KCNH7Q9NS40 1196 aa19.5■□□□□ 0.71
PPFIA3-207ENST00000602716 EML1O00423 815 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 PSMD10O75832 226 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 ALDH5A1P51649 535 aaPredicted RBP19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 ITGB3BPQ13352 177 aaPredicted RBP19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 NCAPH2Q6IBW4 605 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 VSIG10LQ86VR7 867 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 IFNL1Q8IU54 200 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 SLFN12Q8IYM2 578 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 SNX29Q8TEQ0 813 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 MMP19Q99542 508 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 POTEB2H3BUK9 544 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 CCND2P30279 289 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 GCLCP48506 637 aaPredicted RBP19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 MDM2Q00987 491 aaPredicted RBP19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 SETQ01105 290 aaPredicted RBP19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 SHCBP1Q8NEM2 672 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 RASSF8Q8NHQ8 419 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 FAM20AQ96MK3 541 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 ZNF577Q9BSK1 485 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 LRRC37A2A6NM11 1700 aa19.49■□□□□ 0.71
PPFIA3-207ENST00000602716 DNAJC25-GNG10A0A024R161 153 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 DDX39AO00148 427 aaKnown RBP19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 CHMP2AO43633 222 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 SLFN14P0C7P3 912 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 TXLNAP40222 546 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 AFMP43652 599 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 MTMR1Q13613 665 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 TAF1CQ15572 869 aaPredicted RBP19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 LRCH2Q5VUJ6 765 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 KCNK18Q7Z418 384 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 KCNF1Q9H3M0 494 aa19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 AGO4Q9HCK5 861 aaKnown RBP19.48■□□□□ 0.71
PPFIA3-207ENST00000602716 IPO5O00410 1097 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-207ENST00000602716 ATP9AO75110 1047 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms