RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 MLXIPQ9HAP2 919 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 RTEL1Q9NZ71 1219 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 ZNF286BP0CG31 522 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 TGFB3P10600 412 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 MRPS9P82933 396 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 BFSP2Q13515 415 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 GRIN2CQ14957 1233 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 HSDL1Q3SXM5 330 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 C7orf31Q8N865 590 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 KATNAL1Q9BW62 490 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 ZNF576Q9H609 170 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 HDAC6Q9UBN7 1215 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 MYH7BA7E2Y1 1941 aa13.35□□□□□ -0.27
SOX2-OT-233ENST00000600778 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 MEIS2O14770 477 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 MFSD10Q14728 455 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 GNPTABQ3T906 1256 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 SESTD1Q86VW0 696 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 GTF2IRD1Q9UHL9 959 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 MSRAQ9UJ68 235 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 SLC4A7Q9Y6M7 1214 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 FRMPD4Q14CM0 1322 aa13.34□□□□□ -0.27
SOX2-OT-233ENST00000600778 CHD9Q3L8U1 2897 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 HAS3O00219 553 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 PIK3CDO00329 1044 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 STAM2O75886 525 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 F2P00734 622 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 PFKMP08237 780 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 FOSL2P15408 326 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 RFC2P35250 354 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 TSGA10IPQ3SY00 556 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 PSTPIP2Q9H939 334 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
SOX2-OT-233ENST00000600778 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 SPATA31C2B4DYI2 1134 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 FIBPO43427 364 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 ACTN1P12814 892 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 HOXD8P13378 290 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 ICAM3P32942 547 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 RABGGTBP53611 331 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 RAB30Q15771 203 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 UBE2SQ16763 222 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 APOA5Q6Q788 366 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 DHX38Q92620 1227 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 INPP4AQ96PE3 977 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 NKX2-4Q9H2Z4 354 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 BRPF3Q9ULD4 1205 aa13.32□□□□□ -0.28
SOX2-OT-233ENST00000600778 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 ZBTB43O43298 467 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 NEDD9Q14511 834 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 KRT32Q14532 448 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 RTN1Q16799 776 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 HEATR3Q7Z4Q2 680 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 NLRX1Q86UT6 975 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 NAP1L2Q9ULW6 460 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 YBX2Q9Y2T7 364 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-233ENST00000600778 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 H3BRB1 525 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 DLL1O00548 723 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 LGALS2P05162 132 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 CKBP12277 381 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 CPA1P15085 419 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 MYOGP15173 224 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 SELPP16109 830 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 PTK7Q13308 1070 aa13.3□□□□□ -0.28
SOX2-OT-233ENST00000600778 HIC1Q14526 733 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms