RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RRAGBQ5VZM2 374 aa26.28■■□□□ 1.8
SYMPK-212ENST00000598896 SASS6Q6UVJ0 657 aa26.28■■□□□ 1.8
SYMPK-212ENST00000598896 SLC5A5Q92911 643 aa26.28■■□□□ 1.8
SYMPK-212ENST00000598896 PORCNQ9H237 461 aa26.28■■□□□ 1.8
SYMPK-212ENST00000598896 KCNH7Q9NS40 1196 aa26.28■■□□□ 1.8
SYMPK-212ENST00000598896 CCDC39Q9UFE4 941 aa26.28■■□□□ 1.8
SYMPK-212ENST00000598896 BCRP11274 1271 aa26.27■■□□□ 1.8
SYMPK-212ENST00000598896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.27■■□□□ 1.8
SYMPK-212ENST00000598896 NIPA1Q7RTP0 329 aa26.27■■□□□ 1.8
SYMPK-212ENST00000598896 VSIG10LQ86VR7 867 aa26.27■■□□□ 1.8
SYMPK-212ENST00000598896 SNX29Q8TEQ0 813 aa26.27■■□□□ 1.8
SYMPK-212ENST00000598896 JADE2Q9NQC1 790 aa26.27■■□□□ 1.8
SYMPK-212ENST00000598896 FAM155AB1AL88 458 aaPredicted RBP26.26■■□□□ 1.79
SYMPK-212ENST00000598896 IGF2BP3O00425 579 aaKnown RBP eCLIP26.26■■□□□ 1.79
SYMPK-212ENST00000598896 PSMD10O75832 226 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 TOMM70O94826 608 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 COPB2P35606 906 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 AFMP43652 599 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 GRB10Q13322 594 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 KANK3Q6NY19 840 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 STAMQ92783 540 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 PNMA5Q96PV4 448 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 ZNF577Q9BSK1 485 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 TUBE1Q9UJT0 475 aa26.26■■□□□ 1.79
SYMPK-212ENST00000598896 LRCH2Q5VUJ6 765 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 KRT79Q5XKE5 535 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 GPRC5AQ8NFJ5 357 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 PARK7Q99497 189 aaKnown RBP26.25■■□□□ 1.79
SYMPK-212ENST00000598896 EFCC1Q9HA90 598 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 ABT1Q9ULW3 272 aaKnown RBP26.25■■□□□ 1.79
SYMPK-212ENST00000598896 PCDHA5Q9Y5H7 936 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 MANSC4A6NHS7 340 aaPredicted RBP26.25■■□□□ 1.79
SYMPK-212ENST00000598896 IPO5O00410 1097 aaKnown RBP26.25■■□□□ 1.79
SYMPK-212ENST00000598896 CASP1P29466 404 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 CCND2P30279 289 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 MTMR1Q13613 665 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 ECM1Q16610 540 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 DNERQ8NFT8 737 aa26.25■■□□□ 1.79
SYMPK-212ENST00000598896 HOOK1Q9UJC3 728 aaKnown RBP26.25■■□□□ 1.79
SYMPK-212ENST00000598896 GCLCP48506 637 aaPredicted RBP26.24■■□□□ 1.79
SYMPK-212ENST00000598896 FSTL1Q12841 308 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 NCAPH2Q6IBW4 605 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 XRRA1Q6P2D8 792 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 OTOP1Q7RTM1 612 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 FAM133AQ8N9E0 248 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 RNF214Q8ND24 703 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 SHCBP1Q8NEM2 672 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 CALML4Q96GE6 196 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 MROH8Q9H579 483 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 MORF4L1Q9UBU8 362 aa26.24■■□□□ 1.79
SYMPK-212ENST00000598896 TMEM88BA6NKF7 163 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 BIN1O00499 593 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 GRPEL1Q9HAV7 217 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 AGO4Q9HCK5 861 aaKnown RBP26.23■■□□□ 1.79
SYMPK-212ENST00000598896 SOWAHBA6NEL2 793 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 POTEB2H3BUK9 544 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 EML1O00423 815 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 RGS20O76081 388 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 ALDH5A1P51649 535 aaPredicted RBP26.23■■□□□ 1.79
SYMPK-212ENST00000598896 ANO6Q4KMQ2 910 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 WDR78Q5VTH9 848 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 PKD2L1Q9P0L9 805 aa26.23■■□□□ 1.79
SYMPK-212ENST00000598896 KIAA1217Q5T5P2 1943 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 GAS7O60861 476 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 PGK2P07205 417 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 ITGB3BPQ13352 177 aaPredicted RBP26.22■■□□□ 1.79
SYMPK-212ENST00000598896 PPP2R5CQ13362 524 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 TMEM119Q4V9L6 283 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 SPATA20Q8TB22 786 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 INPP4AQ96PE3 977 aaPredicted RBP26.22■■□□□ 1.79
SYMPK-212ENST00000598896 MMP19Q99542 508 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 BLOC1S4Q9NUP1 217 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 LRRC37A2A6NM11 1700 aa26.22■■□□□ 1.79
SYMPK-212ENST00000598896 SARSP49591 514 aaKnown RBP26.21■■□□□ 1.79
SYMPK-212ENST00000598896 DPYDQ12882 1025 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 STX1AQ16623 288 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 HYIQ5T013 277 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 NT5DC1Q5TFE4 455 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 B3GNT9Q6UX72 402 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 KCNK18Q7Z418 384 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 CCDC34Q96HJ3 373 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 DNAJC25Q9H1X3 360 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 ZNFX1Q9P2E3 1918 aaKnown RBP26.21■■□□□ 1.79
SYMPK-212ENST00000598896 DNAJC25-GNG10A0A024R161 153 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 DHX15O43143 795 aaKnown RBP26.21■■□□□ 1.79
SYMPK-212ENST00000598896 MED24O75448 989 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 CCT6AP40227 531 aaKnown RBP26.21■■□□□ 1.79
SYMPK-212ENST00000598896 SEMA3FQ13275 785 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 KCTD2Q14681 263 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 ISM2Q6H9L7 571 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 CDK5RAP3Q96JB5 506 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 FGD4Q96M96 766 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 IWS1Q96ST2 819 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 RIT2Q99578 217 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 CUEDC2Q9H467 287 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 KBTBD4Q9NVX7 518 aa26.21■■□□□ 1.79
SYMPK-212ENST00000598896 POTEB3A0JP26 581 aa26.2■■□□□ 1.78
SYMPK-212ENST00000598896 CHMP2AO43633 222 aa26.2■■□□□ 1.78
SYMPK-212ENST00000598896 CCNA1P78396 465 aa26.2■■□□□ 1.78
SYMPK-212ENST00000598896 DPCR1Q3MIW9 517 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms