RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
VRK3-213ENST00000597215 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 TLK2Q86UE8 772 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 NOSTRINQ8IVI9 506 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 NAP1L4Q99733 375 aaKnown RBP16.33■□□□□ 0.2
VRK3-213ENST00000597215 AP5M1Q9H0R1 490 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 SPC25Q9HBM1 224 aa16.33■□□□□ 0.2
VRK3-213ENST00000597215 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.2
VRK3-213ENST00000597215 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 FAM205CA6NFA0 338 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 FAM86B1E9PN63 330 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 GH1P01241 217 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 FAM86B2P0C5J1 330 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 GCFC2P16383 781 aaKnown RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 SYT1P21579 422 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 UBA1P22314 1058 aaKnown RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 ANP32AP39687 249 aaKnown RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 SEMA3FQ13275 785 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 LETM2Q2VYF4 491 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 PLA2G4DQ86XP0 818 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 CYP2W1Q8TAV3 490 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 UPF3AQ9H1J1 476 aaKnown RBP16.32■□□□□ 0.2
VRK3-213ENST00000597215 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
VRK3-213ENST00000597215 IGLV3-22A0A075B6J6 115 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 CYP3A7-CYP3A51PA0A087WV96 503 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 POTEFA5A3E0 1075 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 DYNC1LI2O43237 492 aaPredicted RBP16.31■□□□□ 0.2
VRK3-213ENST00000597215 EDIL3O43854 480 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 PGK1P00558 417 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 CYP3A7P24462 503 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 GJA9P57773 515 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 NEDD9Q14511 834 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 PRR16Q569H4 304 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 TMEM63BQ5T3F8 832 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 RNF180Q86T96 592 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
VRK3-213ENST00000597215 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
VRK3-213ENST00000597215 OR6J1Q8NGC5 347 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 COPS5Q92905 334 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 SENP7Q9BQF6 1050 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 KCNH7Q9NS40 1196 aa16.31■□□□□ 0.2
VRK3-213ENST00000597215 STX6O43752 255 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 ADAMTS4O75173 837 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 TDP2O95551 362 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 GGPS1O95749 300 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 C6orf222P0C671 652 aaPredicted RBP16.3■□□□□ 0.2
VRK3-213ENST00000597215 ARP10275 920 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
VRK3-213ENST00000597215 NKX3-2P78367 333 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 SP2Q02086 613 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 Q4G0T1 1027 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 CELF3Q5SZQ8 465 aaKnown RBP16.3■□□□□ 0.2
VRK3-213ENST00000597215 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 ANKLE1Q8NAG6 615 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 EMID1Q96A84 441 aaPredicted RBP16.3■□□□□ 0.2
VRK3-213ENST00000597215 MBOAT7Q96N66 472 aa16.3■□□□□ 0.2
VRK3-213ENST00000597215 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
VRK3-213ENST00000597215 NOL7Q9UMY1 257 aaKnown RBP16.3■□□□□ 0.2
VRK3-213ENST00000597215 KBTBD13C9JR72 458 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
VRK3-213ENST00000597215 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
VRK3-213ENST00000597215 KCNA2P16389 499 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 PTGS1P23219 599 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 CST5P28325 142 aaPredicted RBP16.29■□□□□ 0.2
VRK3-213ENST00000597215 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 CPT1AP50416 773 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 SOX10P56693 466 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 LRRC41Q15345 812 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 FSCN1Q16658 493 aaKnown RBP16.29■□□□□ 0.2
VRK3-213ENST00000597215 BRDTQ58F21 947 aaPredicted RBP16.29■□□□□ 0.2
VRK3-213ENST00000597215 METTL7BQ6UX53 244 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 LENG9Q96B70 501 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 MLXIPQ9HAP2 919 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 AGO4Q9HCK5 861 aaKnown RBP16.29■□□□□ 0.2
VRK3-213ENST00000597215 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
VRK3-213ENST00000597215 NFASCO94856 1347 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 IPO5O00410 1097 aaKnown RBP16.28■□□□□ 0.2
VRK3-213ENST00000597215 DNM1LO00429 736 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 ZEB2O60315 1214 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 ATP9AO75110 1047 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 EN2P19622 333 aaPredicted RBP16.28■□□□□ 0.2
VRK3-213ENST00000597215 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 KLHDC9Q8NEP7 349 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 ZNF577Q9BSK1 485 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 PKD2L1Q9P0L9 805 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 MTMR6Q9Y217 621 aa16.28■□□□□ 0.2
VRK3-213ENST00000597215 MYADML2A6NDP7 307 aa16.27■□□□□ 0.2
VRK3-213ENST00000597215 CTAGE5O15320 804 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms