RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 SLF2Q8IX21 1173 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 FBXO16Q8IX29 292 aaPredicted RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 ZDHHC14Q8IZN3 488 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 KLHL23Q8NBE8 558 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 PJA1Q8NG27 643 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 KLHDC4Q8TBB5 520 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 RSAD2Q8WXG1 361 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 IL17RAQ96F46 866 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 MTG1Q9BT17 334 aaPredicted RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 GINM1Q9NU53 330 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 POLR3EQ9NVU0 708 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 ZNF214Q9UL59 606 aaPredicted RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 RAB23Q9ULC3 237 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 LCTP09848 1927 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 FLT1P17948 1338 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 LRP3O75074 770 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 RETP07949 1114 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 PPP2R1AP30153 589 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 TMPOP42166 694 aaKnown RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 PLCD1P51178 756 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 LIMK1P53667 647 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 RIPPLY3P57055 190 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 KCNC3Q14003 757 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 PUM3Q15397 648 aaKnown RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 ABCB5Q2M3G0 1257 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 TAPT1Q6NXT6 567 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 NFRKBQ6P4R8 1299 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 ZNF467Q7Z7K2 595 aaPredicted RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 CCDC155Q8N6L0 562 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 MAGEB6Q8N7X4 407 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 C12orf76Q8N812 135 aaPredicted RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 REPS2Q8NFH8 660 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 GPR152Q8TDT2 470 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 MICAL1Q8TDZ2 1067 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 TGFBRAP1Q8WUH2 860 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 SPIRE2Q8WWL2 714 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 CLP1Q92989 425 aaKnown RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 MKNK1Q9BUB5 465 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 SMOC1Q9H4F8 434 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 MYH16Q9H6N6 1097 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 KCNK12Q9HB15 430 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 RC3H2Q9HBD1 1191 aaKnown RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 FBXO4Q9UKT5 387 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 MTF2Q9Y483 593 aaPredicted RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 MRPL42Q9Y6G3 142 aaKnown RBP3.8□□□□□ -1.8
VRK3-204ENST00000593912 SDK1Q7Z5N4 2213 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 CREBBPQ92793 2442 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 C2orf16Q68DN1 1984 aa3.8□□□□□ -1.8
VRK3-204ENST00000593912 DNHD1Q96M86 4753 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 DOCK8Q8NF50 2099 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 VWA5AO00534 786 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 EOMESO95936 686 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 CLCN6P51797 869 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 ERVFC1P60507 584 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 KCNC4Q03721 635 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 RBL2Q08999 1139 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 APOBRQ0VD83 1088 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 SRSF5Q13243 272 aaKnown RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 RASGRF1Q13972 1273 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 BTG3Q14201 252 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 TRIM71Q2Q1W2 868 aaKnown RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 CERKLQ49MI3 558 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 PAN2Q504Q3 1202 aaKnown RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 PLEKHG4Q58EX7 1191 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 RARS2Q5T160 578 aaKnown RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 PLPP4Q5VZY2 271 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 FOXP4Q8IVH2 680 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 C8orf58Q8NAV2 365 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 ST13P5Q8NFI4 369 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 NELL1Q92832 810 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 SUCLG2Q96I99 432 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 UBL7Q96S82 380 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 DHX36Q9H2U1 1008 aaKnown RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 GPHNQ9NQX3 736 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 CYP26B1Q9NR63 512 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 ARHGEF3Q9NR81 526 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 AAASQ9NRG9 546 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 AATFQ9NY61 560 aaKnown RBP eCLIP3.79□□□□□ -1.8
VRK3-204ENST00000593912 WNT16Q9UBV4 365 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 DBR1Q9UK59 544 aaKnown RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 DENND2AQ9ULE3 1009 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 ADAMTS5Q9UNA0 930 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 RAXQ9Y2V3 346 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 RWDD3Q9Y3V2 267 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 APC2O95996 2303 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 ACACAQ13085 2346 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 PTPRQQ9UMZ3 2332 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 ZFHX3Q15911 3703 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 KIAA1217Q5T5P2 1943 aa3.79□□□□□ -1.8
VRK3-204ENST00000593912 COL5A1P20908 1838 aaPredicted RBP3.79□□□□□ -1.8
VRK3-204ENST00000593912 POLQO75417 2590 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 MYO5AQ9Y4I1 1855 aaKnown RBP3.78□□□□□ -1.8
VRK3-204ENST00000593912 MGAQ8IWI9 3026 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 PARNO95453 639 aaKnown RBP3.78□□□□□ -1.8
VRK3-204ENST00000593912 ADORA1P30542 326 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 PTPN11Q06124 597 aaPredicted RBP3.78□□□□□ -1.8
VRK3-204ENST00000593912 SCAPQ12770 1279 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 COLEC12Q5KU26 742 aa3.78□□□□□ -1.8
VRK3-204ENST00000593912 SH3PXD2AQ5TCZ1 1133 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms