RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
VMP1-217ENST00000593168 TDP2O95551 362 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 SYKP43405 635 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 ZNF445P59923 1031 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 HERVK_113P62684 666 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 IL17AQ16552 155 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 POTEEQ6S8J3 1075 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 RIOX2Q8IUF8 465 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 GTF3C2Q8WUA4 911 aaPredicted RBP15.23■□□□□ 0.03
VMP1-217ENST00000593168 TIGD1Q96MW7 591 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 GDF15Q99988 308 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 NUP62CLQ9H1M0 184 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 CLSTN2Q9H4D0 955 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 ACAD9Q9H845 621 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 DDX25Q9UHL0 483 aaKnown RBP15.23■□□□□ 0.03
VMP1-217ENST00000593168 PNMA3Q9UL41 463 aa15.23■□□□□ 0.03
VMP1-217ENST00000593168 CTAGE5O15320 804 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 ZNF202O95125 648 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 RPS6P62753 249 aaKnown RBP15.22■□□□□ 0.03
VMP1-217ENST00000593168 TRIM32Q13049 653 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 CALCRLQ16602 461 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 FAM110CQ1W6H9 321 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 Q4G0T1 1027 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 RNF207Q6ZRF8 634 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 NECAB2Q7Z6G3 386 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 C7orf61Q8IZ16 206 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 SYTL5Q8TDW5 730 aaPredicted RBP15.22■□□□□ 0.03
VMP1-217ENST00000593168 AK8Q96MA6 479 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 BTBD7Q9P203 1132 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 KCNH3Q9ULD8 1083 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 A0A0G2JMZ2 1700 aa15.22■□□□□ 0.03
VMP1-217ENST00000593168 RPTORQ8N122 1335 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 TBX3O15119 743 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 SLC37A4O43826 429 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 BMP8BP34820 402 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 COPB2P35606 906 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
VMP1-217ENST00000593168 PLS1Q14651 629 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.03
VMP1-217ENST00000593168 ELOA2Q8IYF1 753 aaPredicted RBP15.21■□□□□ 0.03
VMP1-217ENST00000593168 PYM1Q9BRP8 204 aaKnown RBP15.21■□□□□ 0.03
VMP1-217ENST00000593168 SPATC1LQ9H0A9 340 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 TNMDQ9H2S6 317 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 COL20A1Q9P218 1284 aa15.21■□□□□ 0.03
VMP1-217ENST00000593168 ZMYND8Q9ULU4 1186 aaPredicted RBP15.21■□□□□ 0.03
VMP1-217ENST00000593168 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 CNMDO75829 334 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 SLC25A27O95847 323 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 ZNF76P36508 570 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
VMP1-217ENST00000593168 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
VMP1-217ENST00000593168 PDIA5Q14554 519 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 GSE1Q14687 1217 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 SPECC1Q5M775 1068 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 NSMFQ6X4W1 530 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 ANKLE1Q8NAG6 615 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 CCSER1Q9C0I3 900 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 RBPJLQ9UBG7 517 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
VMP1-217ENST00000593168 SYCE3A1L190 88 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 HMGCRP04035 888 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 SYN1P17600 705 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 TXKP42681 527 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 TMEM266Q2M3C6 531 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 USP49Q70CQ1 688 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 Q7L0L9 218 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
VMP1-217ENST00000593168 SLFN12Q8IYM2 578 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 IGSF22Q8N9C0 903 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 SYMPKQ92797 1274 aaKnown RBP15.19■□□□□ 0.02
VMP1-217ENST00000593168 HAS1Q92839 578 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 TAAR1Q96RJ0 339 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 SDF4Q9BRK5 362 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
VMP1-217ENST00000593168 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
VMP1-217ENST00000593168 FAM86B1E9PN63 330 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 MARCH6O60337 910 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 FAM86B2P0C5J1 330 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 TXLNAP40222 546 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 UBA7P41226 1012 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 TECP42680 631 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
VMP1-217ENST00000593168 CAMK4Q16566 473 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 CEP55Q53EZ4 464 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 PRR16Q569H4 304 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 XRRA1Q6P2D8 792 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 LRSAM1Q6UWE0 723 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 SLC30A10Q6XR72 485 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 NIPA1Q7RTP0 329 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 LENG9Q96B70 501 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 MOV10L1Q9BXT6 1211 aaKnown RBP15.18■□□□□ 0.02
VMP1-217ENST00000593168 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
VMP1-217ENST00000593168 A0A0C4DFX4 3053 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms