RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GHRHRQ02643 423 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 HSDL1Q3SXM5 330 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 CELF3Q5SZQ8 465 aaKnown RBP20.73■□□□□ 0.91
CIRBP-243ENST00000593128 MYSM1Q5VVJ2 828 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 SESTD1Q86VW0 696 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 SAMD3Q8N6K7 520 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 SMARCC2Q8TAQ2 1214 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 DHX38Q92620 1227 aaKnown RBP20.73■□□□□ 0.91
CIRBP-243ENST00000593128 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
CIRBP-243ENST00000593128 SLC9A7Q96T83 725 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 LY9Q9HBG7 655 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 RTEL1Q9NZ71 1219 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 SEC63Q9UGP8 760 aaKnown RBP20.73■□□□□ 0.91
CIRBP-243ENST00000593128 CHD9Q3L8U1 2897 aa20.73■□□□□ 0.91
CIRBP-243ENST00000593128 RBAK-RBAKDNI3L0D1 243 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 F2P00734 622 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 RXRAP19793 462 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 KIF5BP33176 963 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 ZNF200P98182 395 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-243ENST00000593128 SP2Q02086 613 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 CUL5Q93034 780 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 CTAGE1Q96RT6 745 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 DOCK5Q9H7D0 1870 aa20.72■□□□□ 0.91
CIRBP-243ENST00000593128 TET1Q8NFU7 2136 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 KIF28PB7ZC32 967 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 NOP56O00567 594 aaKnown RBP20.71■□□□□ 0.91
CIRBP-243ENST00000593128 DDAH1O94760 285 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 CKBP12277 381 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 GNPTABQ3T906 1256 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 HERC6Q8IVU3 1022 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 CMTR1Q8N1G2 835 aaKnown RBP20.71■□□□□ 0.91
CIRBP-243ENST00000593128 ANO2Q9NQ90 1003 aa20.71■□□□□ 0.91
CIRBP-243ENST00000593128 VCANP13611 3396 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 RFXAPO00287 272 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 PPFIA4O75335 1185 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 PLEKHA8P1O95397 391 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 MCM5P33992 734 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 SP4Q02446 784 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 TMCO2Q7Z6W1 182 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-243ENST00000593128 SKAP1Q86WV1 359 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 ESYT1Q9BSJ8 1104 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 ZBED2Q9BTP6 218 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 LSG1Q9H089 658 aaKnown RBP20.7■□□□□ 0.9
CIRBP-243ENST00000593128 BCAS3Q9H6U6 928 aa20.7■□□□□ 0.9
CIRBP-243ENST00000593128 SLC27A2O14975 620 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 TLL1O43897 1013 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 BAIAP3O94812 1187 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 TGFB3P10600 412 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 PTK7Q13308 1070 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 SKIV2LQ15477 1246 aaKnown RBP20.69■□□□□ 0.9
CIRBP-243ENST00000593128 USP17L6PQ6QN14 398 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 CCDC82Q8N4S0 544 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 PHOSPHO2Q8TCD6 241 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 ARNTL2Q8WYA1 636 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 SYMPKQ92797 1274 aaKnown RBP20.69■□□□□ 0.9
CIRBP-243ENST00000593128 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
CIRBP-243ENST00000593128 hCG_1642624A0A1W2PR95 340 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 HAS3O00219 553 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 SH2B2O14492 632 aaPredicted RBP20.68■□□□□ 0.9
CIRBP-243ENST00000593128 MRPS9P82933 396 aaKnown RBP20.68■□□□□ 0.9
CIRBP-243ENST00000593128 TJAP1Q5JTD0 557 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 ZNF618Q5T7W0 954 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 CREB3L3Q68CJ9 461 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 CYFIP1Q7L576 1253 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 WNT8BQ93098 351 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 THEGQ9P2T0 379 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 CHD7Q9P2D1 2997 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 PTPRSQ13332 1948 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 CUL9Q8IWT3 2517 aa20.68■□□□□ 0.9
CIRBP-243ENST00000593128 NBNO60934 754 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 THPOP40225 353 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 GNAQP50148 359 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 WDR5P61964 334 aaKnown RBP20.67■□□□□ 0.9
CIRBP-243ENST00000593128 DEFB103AP81534 67 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 COL9A3Q14050 684 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-243ENST00000593128 HIC1Q14526 733 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 UTP14CQ5TAP6 766 aaKnown RBP20.67■□□□□ 0.9
CIRBP-243ENST00000593128 FAM117BQ6P1L5 589 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 CNKSR3Q6P9H4 555 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 SRBD1Q8N5C6 995 aaKnown RBP20.67■□□□□ 0.9
CIRBP-243ENST00000593128 IL27Q8NEV9 243 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 TMEM87BQ96K49 555 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 LZTS2Q9BRK4 669 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 SLC12A7Q9Y666 1083 aa20.67■□□□□ 0.9
CIRBP-243ENST00000593128 C17orf102A2RUQ5 167 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 H3BRB1 525 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 FIBPO43427 364 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 GTPBP6O43824 516 aaPredicted RBP20.66■□□□□ 0.9
CIRBP-243ENST00000593128 LGALS2P05162 132 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 NEDD9Q14511 834 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 GPNMBQ14956 572 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 TMTC2Q8N394 836 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 ATP6V0A1Q93050 837 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 MAP3K14Q99558 947 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 C16orf70Q9BSU1 422 aa20.66■□□□□ 0.9
CIRBP-243ENST00000593128 TSPYL2Q9H2G4 693 aaPredicted RBP20.66■□□□□ 0.9
CIRBP-243ENST00000593128 TUT1Q9H6E5 874 aaKnown RBP20.66■□□□□ 0.9
CIRBP-243ENST00000593128 STAM2O75886 525 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms