RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 BCRP11274 1271 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 MYCLP12524 364 aaPredicted RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 PLCG1P19174 1290 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 AFMP43652 599 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 MRE11P49959 708 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 SETQ01105 290 aaPredicted RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 GRB10Q13322 594 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 NIPA1Q7RTP0 329 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 VSIG10LQ86VR7 867 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 RNF214Q8ND24 703 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 STAMQ92783 540 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 PNMA5Q96PV4 448 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 KCNH7Q9NS40 1196 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 HOOK1Q9UJC3 728 aaKnown RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 ASTN1O14525 1302 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 LCTP09848 1927 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 BIN1O00499 593 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 NR3C2P08235 984 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 CASP1P29466 404 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 DEKP35659 375 aaKnown RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 ERVK-9P63128 1117 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 ERVK-24P63145 666 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 CNTN2Q02246 1040 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 ECM1Q16610 540 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 STX1AQ16623 288 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 NT5DC1Q5TFE4 455 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 KRT79Q5XKE5 535 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 RGMBQ6NW40 437 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 OTOP1Q7RTM1 612 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 SMCR8Q8TEV9 937 aaPredicted RBP12.81□□□□□ -0.36
TUBD1-211ENST00000591548 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 JADE2Q9NQC1 790 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 PFASO15067 1338 aa12.81□□□□□ -0.36
TUBD1-211ENST00000591548 IPO5O00410 1097 aaKnown RBP12.8□□□□□ -0.36
TUBD1-211ENST00000591548 CCND2P30279 289 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 DPYDQ12882 1025 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 HYIQ5T013 277 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
TUBD1-211ENST00000591548 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 ZNF577Q9BSK1 485 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 CUEDC2Q9H467 287 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 KBTBD4Q9NVX7 518 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
TUBD1-211ENST00000591548 EML1O00423 815 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
TUBD1-211ENST00000591548 BMP6P22004 513 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 COPB2P35606 906 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 CCT6AP40227 531 aaKnown RBP12.79□□□□□ -0.36
TUBD1-211ENST00000591548 NLRP12P59046 1061 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 FSTL1Q12841 308 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 PPP2R5CQ13362 524 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 MTMR1Q13613 665 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 L1TD1Q5T7N2 865 aaKnown RBP12.79□□□□□ -0.36
TUBD1-211ENST00000591548 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 NCAPH2Q6IBW4 605 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 B3GNT9Q6UX72 402 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
TUBD1-211ENST00000591548 KCNK18Q7Z418 384 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 ANKRD13CQ8N6S4 541 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 FAM133AQ8N9E0 248 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 SHCBP1Q8NEM2 672 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 PORCNQ9H237 461 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 BLZF1Q9H2G9 400 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 MROH8Q9H579 483 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 AGO4Q9HCK5 861 aaKnown RBP12.79□□□□□ -0.36
TUBD1-211ENST00000591548 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
TUBD1-211ENST00000591548 SOWAHBA6NEL2 793 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 IGF2BP3O00425 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 GAS7O60861 476 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 MED24O75448 989 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 RGS20O76081 388 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 SLC10A3P09131 477 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 GCLCP48506 637 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 ITGB3BPQ13352 177 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 CUL4BQ13620 913 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms