RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 ZDHHC9Q9Y397 364 aa20.84■□□□□ 0.93
CROCCP3-205ENST00000591316 ARIH2O95376 493 aa20.83■□□□□ 0.92
CROCCP3-205ENST00000591316 F13A1P00488 732 aa20.83■□□□□ 0.92
CROCCP3-205ENST00000591316 TTLL4Q14679 1199 aa20.83■□□□□ 0.92
CROCCP3-205ENST00000591316 GJC2Q5T442 439 aaPredicted RBP20.83■□□□□ 0.92
CROCCP3-205ENST00000591316 NRBP1Q9UHY1 535 aa20.83■□□□□ 0.92
CROCCP3-205ENST00000591316 IGLV3-22A0A075B6J6 115 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 CYP3A7-CYP3A51PA0A087WV96 503 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 SPATA31C2B4DYI2 1134 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 FIBPO43427 364 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 ATP9AO75110 1047 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 BRD1O95696 1058 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 SMPD1P17405 629 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 CYP3A7P24462 503 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 SP2Q02086 613 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 TTC38Q5R3I4 469 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 MYSM1Q5VVJ2 828 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 PPP4R3AQ6IN85 833 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 COPS5Q92905 334 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 GJA10Q969M2 543 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 LENG1Q96BZ8 264 aaPredicted RBP20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 GPRASP2Q96D09 838 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 RNF208Q9H0X6 261 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 DDX41Q9UJV9 622 aaKnown RBP20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 PCDHB6Q9Y5E3 794 aa20.82■□□□□ 0.92
CROCCP3-205ENST00000591316 RBM47A0AV96 593 aaKnown RBP20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 MAFGO15525 162 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 SEPT4O43236 478 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 ADCY6O43306 1168 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 SLC37A4O43826 429 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 MARCH6O60337 910 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 CCL5P13501 91 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 AKR1A1P14550 325 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 DDIT3P35638 169 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 SEMA3FQ13275 785 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 RILPL1Q5EBL4 403 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 NAP1L4Q99733 375 aaKnown RBP20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 BCAS3Q9H6U6 928 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 MYH7BA7E2Y1 1941 aa20.81■□□□□ 0.92
CROCCP3-205ENST00000591316 ICAM3P32942 547 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 TRAPPC10P48553 1259 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 NUCB2P80303 420 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 Q4G0T1 1027 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 CCDC62Q6P9F0 684 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 KCNV1Q6PIU1 500 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 LENG9Q96B70 501 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 ZNF333Q96JL9 665 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 CDHR1Q96JP9 859 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 ZNF577Q9BSK1 485 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 DYNC1LI2O43237 492 aaPredicted RBP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 MYCNP04198 464 aaPredicted RBP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 TGFB3P10600 412 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 GCFC2P16383 781 aaKnown RBP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 CEBPZQ03701 1054 aaKnown RBP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 MOXD1Q6UVY6 613 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 NIPA1Q7RTP0 329 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 ARMC5Q96C12 935 aa20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 AGO4Q9HCK5 861 aaKnown RBP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 DDX20Q9UHI6 824 aaKnown RBP20.8■□□□□ 0.92
CROCCP3-205ENST00000591316 MSH4O15457 936 aa20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 DUSP28Q4G0W2 176 aa20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 CYFIP1Q7L576 1253 aa20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 MBOAT7Q96N66 472 aa20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 MLXIPQ9HAP2 919 aa20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
CROCCP3-205ENST00000591316 DDX39AO00148 427 aaKnown RBP20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 IPO5O00410 1097 aaKnown RBP20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 NEMFO60524 1076 aa20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 RARBP10826 455 aa20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 SP4Q02446 784 aa20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 DEFB118Q96PH6 123 aa20.78■□□□□ 0.92
CROCCP3-205ENST00000591316 GGPS1O95749 300 aa20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 KCNA2P16389 499 aa20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 UBA1P22314 1058 aaKnown RBP20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 IRX5P78411 483 aaPredicted RBP20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 NEDD9Q14511 834 aa20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 CALCRLQ16602 461 aa20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 FTOQ9C0B1 505 aaKnown RBP eCLIP20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 TMEM60Q9H2L4 133 aa20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 GNEQ9Y223 722 aaKnown RBP20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 CLIC4Q9Y696 253 aa20.77■□□□□ 0.92
CROCCP3-205ENST00000591316 DUSP11O75319 330 aaKnown RBP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 BAG4O95429 457 aaKnown RBP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 PGK1P00558 417 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 ITGB3BPQ13352 177 aaPredicted RBP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 SF3A1Q15459 793 aaKnown RBP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 CELF3Q5SZQ8 465 aaKnown RBP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 OR6J1Q8NGC5 347 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 SENP7Q9BQF6 1050 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 SDF4Q9BRK5 362 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 AP5M1Q9H0R1 490 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 NKRFO15226 690 aaKnown RBP eCLIP20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 GH1P01241 217 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 TXKP42681 527 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 PTGDRQ13258 359 aa20.76■□□□□ 0.91
CROCCP3-205ENST00000591316 LHX8Q68G74 356 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms