RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 CCDC155Q8N6L0 562 aa27.53■■■□□ 2
LSM7-205ENST00000589532 KATNAL1Q9BW62 490 aa27.53■■■□□ 2
LSM7-205ENST00000589532 LY9Q9HBG7 655 aa27.53■■■□□ 2
LSM7-205ENST00000589532 HDAC6Q9UBN7 1215 aa27.53■■■□□ 2
LSM7-205ENST00000589532 BAIAP3O94812 1187 aa27.52■■■□□ 2
LSM7-205ENST00000589532 TRAF1Q13077 416 aa27.52■■■□□ 2
LSM7-205ENST00000589532 MFSD10Q14728 455 aa27.52■■■□□ 2
LSM7-205ENST00000589532 SART3Q15020 963 aaKnown RBP27.52■■■□□ 2
LSM7-205ENST00000589532 TRIM71Q2Q1W2 868 aaKnown RBP27.52■■■□□ 2
LSM7-205ENST00000589532 KCNV1Q6PIU1 500 aa27.52■■■□□ 2
LSM7-205ENST00000589532 CASC1Q6TDU7 716 aa27.52■■■□□ 2
LSM7-205ENST00000589532 DHX37Q8IY37 1157 aaKnown RBP27.52■■■□□ 2
LSM7-205ENST00000589532 PHOSPHO2Q8TCD6 241 aa27.52■■■□□ 2
LSM7-205ENST00000589532 GPKOWQ92917 476 aaPredicted RBP eCLIP27.52■■■□□ 2
LSM7-205ENST00000589532 WNT8BQ93098 351 aa27.52■■■□□ 2
LSM7-205ENST00000589532 MAP3K14Q99558 947 aa27.52■■■□□ 2
LSM7-205ENST00000589532 ARHGEF15O94989 841 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 GGPS1O95749 300 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 CXCL10P02778 98 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 CA3P07451 260 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 SELPP16109 830 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 HIC1Q14526 733 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 KIAA0753Q2KHM9 967 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 LRRC8DQ7L1W4 858 aa27.51■■□□□ 1.99
LSM7-205ENST00000589532 COL4A4P53420 1690 aaPredicted RBP27.51■■□□□ 1.99
LSM7-205ENST00000589532 CCND2P30279 289 aa27.5■■□□□ 1.99
LSM7-205ENST00000589532 MRPS9P82933 396 aaKnown RBP27.5■■□□□ 1.99
LSM7-205ENST00000589532 TJAP1Q5JTD0 557 aa27.5■■□□□ 1.99
LSM7-205ENST00000589532 CATIPQ7Z7H3 387 aa27.5■■□□□ 1.99
LSM7-205ENST00000589532 MTA3Q9BTC8 594 aa27.5■■□□□ 1.99
LSM7-205ENST00000589532 SPZ1Q9BXG8 430 aa27.5■■□□□ 1.99
LSM7-205ENST00000589532 LSG1Q9H089 658 aaKnown RBP27.5■■□□□ 1.99
LSM7-205ENST00000589532 DOCK5Q9H7D0 1870 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 DDAH1O94760 285 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 TGFB3P10600 412 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 CKBP12277 381 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 HOXC8P31273 242 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 TCTN1Q2MV58 587 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 HERC6Q8IVU3 1022 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 ZNF654Q8IZM8 581 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 C7orf31Q8N865 590 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 ZFP91Q96JP5 570 aaPredicted RBP27.49■■□□□ 1.99
LSM7-205ENST00000589532 SPATA33Q96N06 139 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 INPP4AQ96PE3 977 aaPredicted RBP27.49■■□□□ 1.99
LSM7-205ENST00000589532 C16orf70Q9BSU1 422 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 ALG1Q9BT22 464 aa27.49■■□□□ 1.99
LSM7-205ENST00000589532 NBNO60934 754 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 PPFIA4O75335 1185 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 SEMA3FQ13275 785 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 PTK7Q13308 1070 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 FCHSD1Q86WN1 690 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 MYL10Q9BUA6 226 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 FTOQ9C0B1 505 aaKnown RBP eCLIP27.48■■□□□ 1.99
LSM7-205ENST00000589532 NCOR1O75376 2440 aa27.48■■□□□ 1.99
LSM7-205ENST00000589532 PRRC2BQ5JSZ5 2229 aaKnown RBP27.47■■□□□ 1.99
LSM7-205ENST00000589532 RBAK-RBAKDNI3L0D1 243 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 SH2B2O14492 632 aaPredicted RBP27.47■■□□□ 1.99
LSM7-205ENST00000589532 SORBS3O60504 671 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 ICAM3P32942 547 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 WDR5P61964 334 aaKnown RBP27.47■■□□□ 1.99
LSM7-205ENST00000589532 MBTPS1Q14703 1052 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 PPM1EQ8WY54 764 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 BCAS3Q9H6U6 928 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 THEGQ9P2T0 379 aa27.47■■□□□ 1.99
LSM7-205ENST00000589532 EPOPA6NHQ4 379 aa27.46■■□□□ 1.99
LSM7-205ENST00000589532 PARNO95453 639 aaKnown RBP27.46■■□□□ 1.99
LSM7-205ENST00000589532 IGFBP4P22692 258 aa27.46■■□□□ 1.99
LSM7-205ENST00000589532 ZNF200P98182 395 aaPredicted RBP27.46■■□□□ 1.99
LSM7-205ENST00000589532 TAP1Q03518 808 aa27.46■■□□□ 1.99
LSM7-205ENST00000589532 SKAP1Q86WV1 359 aa27.46■■□□□ 1.99
LSM7-205ENST00000589532 SYMPKQ92797 1274 aaKnown RBP27.46■■□□□ 1.99
LSM7-205ENST00000589532 PRC1O43663 620 aa27.45■■□□□ 1.98
LSM7-205ENST00000589532 POU3F3P20264 500 aaPredicted RBP27.45■■□□□ 1.98
LSM7-205ENST00000589532 SMARCA1P28370 1054 aa27.45■■□□□ 1.98
LSM7-205ENST00000589532 CNKSR3Q6P9H4 555 aa27.45■■□□□ 1.98
LSM7-205ENST00000589532 ATXN2LQ8WWM7 1075 aaKnown RBP27.45■■□□□ 1.98
LSM7-205ENST00000589532 PIK3CDO00329 1044 aa27.44■■□□□ 1.98
LSM7-205ENST00000589532 MEIS2O14770 477 aa27.44■■□□□ 1.98
LSM7-205ENST00000589532 STAM2O75886 525 aa27.44■■□□□ 1.98
LSM7-205ENST00000589532 PLEKHA8P1O95397 391 aa27.44■■□□□ 1.98
LSM7-205ENST00000589532 MKRN4PQ13434 485 aaPredicted RBP27.44■■□□□ 1.98
LSM7-205ENST00000589532 SERINC5Q86VE9 423 aa27.44■■□□□ 1.98
LSM7-205ENST00000589532 CTCFLQ8NI51 663 aaPredicted RBP27.44■■□□□ 1.98
LSM7-205ENST00000589532 ESYT1Q9BSJ8 1104 aa27.44■■□□□ 1.98
LSM7-205ENST00000589532 SPATA31C2B4DYI2 1134 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 SLC27A2O14975 620 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 CDC45O75419 566 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 LGALS2P05162 132 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 DEFB103AP81534 67 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 CCDC85BQ15834 202 aaPredicted RBP27.43■■□□□ 1.98
LSM7-205ENST00000589532 ZNF618Q5T7W0 954 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 SPRED2Q7Z698 418 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 PIBF1Q8WXW3 757 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 MICAL3Q7RTP6 2002 aa27.43■■□□□ 1.98
LSM7-205ENST00000589532 RFXAPO00287 272 aa27.42■■□□□ 1.98
LSM7-205ENST00000589532 KIF5BP33176 963 aa27.42■■□□□ 1.98
LSM7-205ENST00000589532 NECTIN1Q15223 517 aa27.42■■□□□ 1.98
LSM7-205ENST00000589532 GNPTABQ3T906 1256 aa27.42■■□□□ 1.98
LSM7-205ENST00000589532 USP17L6PQ6QN14 398 aa27.42■■□□□ 1.98
LSM7-205ENST00000589532 METTL7BQ6UX53 244 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms