RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 HGSNATQ68CP4 663 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 NFRKBQ6P4R8 1299 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 FOXR1Q6PIV2 292 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 DNAJC19Q96DA6 116 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 RFC4P35249 363 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 SEPT2Q15019 361 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 CACNA2D4Q7Z3S7 1137 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MYOCDQ8IZQ8 938 aa15.71■□□□□ 0.11
CDK5RAP3-237ENST00000585163 GOLGA6BA6NDN3 693 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 FKBP3Q00688 224 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GFPT1Q06210 699 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ECM1Q16610 540 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CCDC155Q8N6L0 562 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 COL4A3BPQ9Y5P4 624 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ERCC3P19447 782 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TNNI2P48788 182 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CLK2P49760 499 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 COASYQ13057 564 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 LRRC47Q8N1G4 583 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SYN2Q92777 582 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 HAS1Q92839 578 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MTMR8Q96EF0 704 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TLR10Q9BXR5 811 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TANGO6Q9C0B7 1094 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NUCKS1Q9H1E3 243 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 FOCADQ5VW36 1801 aa15.7■□□□□ 0.1
CDK5RAP3-237ENST00000585163 IGKV6D-41A0A0C4DH26 115 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CXCR5P32302 372 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RASSF7Q02833 373 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GABPAQ06546 454 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TRAPPC3LQ5T215 181 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CCDC181Q5TID7 509 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RPGRQ92834 1020 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NOX5Q96PH1 765 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 HINFPQ9BQA5 517 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 JMJD4Q9H9V9 463 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CEP72Q9P209 647 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SLC1A4P43007 532 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 KLHDC7AQ5VTJ3 777 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SND1Q7KZF4 910 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TBC1D22AQ8WUA7 517 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PSMB7Q99436 277 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 STIM2Q9P246 746 aa15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 DDX25Q9UHL0 483 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TRIM66O15016 1216 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SHOX2O60902 331 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NOL4O94818 638 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PAFAH1B1P43034 410 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CRY2Q49AN0 593 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SLC9C1Q4G0N8 1177 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 HAUS3Q68CZ6 603 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GPIHBP1Q8IV16 184 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RASSF4Q9H2L5 321 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GPCPD1Q9NPB8 672 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PANK4Q9NVE7 773 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TRAF5O00463 557 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NCK2O43639 380 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TLR2O60603 784 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PPP1R11O60927 126 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PPFIA4O75335 1185 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 AKR1B1P15121 316 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MATR3P43243 847 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 EPHB4P54760 987 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ZNF543Q08ER8 600 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 UBE2SQ16763 222 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 HYIQ5T013 277 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 FAM83BQ5T0W9 1011 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PRR5LQ6MZQ0 368 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ADGRF4Q8IZF3 695 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 FAM76AQ8TAV0 307 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CERKQ8TCT0 537 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CEP63Q96MT8 703 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TAF1LQ8IZX4 1826 aa15.68■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GOLGA6CA6NDK9 693 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SERPING1P05155 500 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GOLGA6DP0CG33 693 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TNFRSF8P28908 595 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SLC7A5Q01650 507 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CCDC40Q4G0X9 1142 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TDRD12Q587J7 1177 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 EMBQ6PCB8 327 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 C10orf67Q8IYJ2 551 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NLRC4Q9NPP4 1024 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GOLGA6AQ9NYA3 693 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SMARCAL1Q9NZC9 954 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PCDHA12Q9UN75 941 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms