RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ADGRE1Q14246 886 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 CCDC85BQ15834 202 aaPredicted RBP23.61■■□□□ 1.37
TOP3A-219ENST00000584887 MYSM1Q5VVJ2 828 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 LRRC8DQ7L1W4 858 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 SLC9A7Q96T83 725 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 ESYT1Q9BSJ8 1104 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
TOP3A-219ENST00000584887 PRDM6Q9NQX0 595 aa23.61■■□□□ 1.37
TOP3A-219ENST00000584887 SEC63Q9UGP8 760 aaKnown RBP23.61■■□□□ 1.37
TOP3A-219ENST00000584887 CCDC69A6NI79 296 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 MCM5P33992 734 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 SP2Q02086 613 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 HSDL1Q3SXM5 330 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 SMARCC2Q8TAQ2 1214 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 CUL5Q93034 780 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 SPZ1Q9BXG8 430 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 ANO2Q9NQ90 1003 aa23.6■■□□□ 1.37
TOP3A-219ENST00000584887 SLC27A2O14975 620 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 CA3P07451 260 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 RXRAP19793 462 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 KCNJ6P48051 423 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 GNPTABQ3T906 1256 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 RAB11FIP4Q86YS3 637 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 MICALL1Q8N3F8 863 aa23.59■■□□□ 1.37
TOP3A-219ENST00000584887 UNC80Q8N2C7 3258 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 HAS3O00219 553 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 SH2B2O14492 632 aaPredicted RBP23.58■■□□□ 1.37
TOP3A-219ENST00000584887 PPFIA4O75335 1185 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 PLEKHA8P1O95397 391 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 TGFB3P10600 412 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 ZNF200P98182 395 aaPredicted RBP23.58■■□□□ 1.37
TOP3A-219ENST00000584887 CERS4Q9HA82 394 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 RTEL1Q9NZ71 1219 aa23.58■■□□□ 1.37
TOP3A-219ENST00000584887 TTC28Q96AY4 2481 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 NOP56O00567 594 aaKnown RBP23.57■■□□□ 1.36
TOP3A-219ENST00000584887 CKBP12277 381 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 HOXD8P13378 290 aaPredicted RBP23.57■■□□□ 1.36
TOP3A-219ENST00000584887 GNAQP50148 359 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 CREB3L3Q68CJ9 461 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 USP17L6PQ6QN14 398 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 SKAP1Q86WV1 359 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 HERC6Q8IVU3 1022 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 CMTR1Q8N1G2 835 aaKnown RBP23.57■■□□□ 1.36
TOP3A-219ENST00000584887 TMEM87BQ96K49 555 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 MAP3K14Q99558 947 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 LZTS2Q9BRK4 669 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 CDH23Q9H251 3354 aa23.57■■□□□ 1.36
TOP3A-219ENST00000584887 KIF28PB7ZC32 967 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 BAIAP3O94812 1187 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 MRPS9P82933 396 aaKnown RBP23.56■■□□□ 1.36
TOP3A-219ENST00000584887 PTK7Q13308 1070 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
TOP3A-219ENST00000584887 TMTC2Q8N394 836 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 PHOSPHO2Q8TCD6 241 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 BCAS3Q9H6U6 928 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 FRMPD4Q14CM0 1322 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 PRUNE2Q8WUY3 3088 aa23.56■■□□□ 1.36
TOP3A-219ENST00000584887 SP4Q02446 784 aa23.55■■□□□ 1.36
TOP3A-219ENST00000584887 SRBD1Q8N5C6 995 aaKnown RBP23.55■■□□□ 1.36
TOP3A-219ENST00000584887 WNT8BQ93098 351 aa23.55■■□□□ 1.36
TOP3A-219ENST00000584887 MTA3Q9BTC8 594 aa23.55■■□□□ 1.36
TOP3A-219ENST00000584887 SLC12A7Q9Y666 1083 aa23.55■■□□□ 1.36
TOP3A-219ENST00000584887 CHD9Q3L8U1 2897 aa23.55■■□□□ 1.36
TOP3A-219ENST00000584887 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 hCG_1642624A0A1W2PR95 340 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 RBAK-RBAKDNI3L0D1 243 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 NBNO60934 754 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 STAM2O75886 525 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 LGALS2P05162 132 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 CALM1P0DP23 149 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 CALM2P0DP24 149 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 CALM3P0DP25 149 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 WDR5P61964 334 aaKnown RBP23.54■■□□□ 1.36
TOP3A-219ENST00000584887 RBL2Q08999 1139 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 GPNMBQ14956 572 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 ZNF618Q5T7W0 954 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 CNKSR3Q6P9H4 555 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 CYFIP1Q7L576 1253 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 CCDC82Q8N4S0 544 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 INPP4AQ96PE3 977 aaPredicted RBP23.54■■□□□ 1.36
TOP3A-219ENST00000584887 C16orf70Q9BSU1 422 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 THEGQ9P2T0 379 aa23.54■■□□□ 1.36
TOP3A-219ENST00000584887 H3BRB1 525 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 RFXAPO00287 272 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 FIBPO43427 364 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 TLL1O43897 1013 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 PARNO95453 639 aaKnown RBP23.53■■□□□ 1.36
TOP3A-219ENST00000584887 SMARCA1P28370 1054 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 NEDD9Q14511 834 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 HIC1Q14526 733 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 TRIM71Q2Q1W2 868 aaKnown RBP23.53■■□□□ 1.36
TOP3A-219ENST00000584887 TJAP1Q5JTD0 557 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 TMCO2Q7Z6W1 182 aaPredicted RBP23.53■■□□□ 1.36
TOP3A-219ENST00000584887 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 SYMPKQ92797 1274 aaKnown RBP23.53■■□□□ 1.36
TOP3A-219ENST00000584887 ZBED2Q9BTP6 218 aa23.53■■□□□ 1.36
TOP3A-219ENST00000584887 TUT1Q9H6E5 874 aaKnown RBP23.53■■□□□ 1.36
TOP3A-219ENST00000584887 C17orf102A2RUQ5 167 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 SPATA31C2B4DYI2 1134 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms