RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 DMAP1Q9NPF5 467 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-232ENST00000584168 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CCDC166P0CW27 439 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SRGNP10124 158 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PPP1R7Q15435 360 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CAVIN4Q5BKX8 364 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SOGA3Q5TF21 947 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 TOGARAM2Q6ZUX3 1019 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SMC1BQ8NDV3 1235 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ATRIPQ8WXE1 791 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 MYO5AQ9Y4I1 1855 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PRKAB2O43741 272 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 VDRP11473 427 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 TUBP50607 506 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PSMD7P51665 324 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 GOLGA8FQ08AF8 430 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 GOLGA8DPQ0D2H9 430 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PACS1Q6VY07 963 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 MXD3Q9BW11 206 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 RCOR1Q9UKL0 485 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
CDK5RAP3-232ENST00000584168 NDUFB5O43674 189 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PDE6AP16499 860 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 HOXD12P35452 270 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ZMYM1Q5SVZ6 1142 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CCDC73Q6ZRK6 1079 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 NSUN7Q8NE18 718 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 BRIP1Q9BX63 1249 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CROTQ9UKG9 612 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 EVI5O60447 810 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PPP1R37O75864 691 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CTDNEP1O95476 244 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 TFRCP02786 760 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SMARCA1P28370 1054 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 FAAH2Q6GMR7 532 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 KIFAP3Q92845 792 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 LLPHQ9BRT6 129 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 LUC7LQ9NQ29 371 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 KCNQ5Q9NR82 932 aa13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-232ENST00000584168 LRP5O75197 1615 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 P4HA2O15460 535 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ATP2C2O75185 946 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 EPB41P11171 864 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PRDX5P30044 214 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SEC24CP53992 1094 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 USP14P54578 494 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 TAF11Q15544 211 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 THOC7Q6I9Y2 204 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 NAA16Q6N069 864 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 DHX32Q7L7V1 743 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 NAF1Q96HR8 494 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 FGD4Q96M96 766 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CENPOQ9BU64 300 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 TMED5Q9Y3A6 229 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 FOXP2O15409 715 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 GPAA1O43292 621 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 UQCRFS1P1P0C7P4 283 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ME1P48163 572 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 KRT72Q14CN4 511 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CEP128Q6ZU80 1094 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 MAATS1Q7Z4T9 603 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 P3H4Q92791 437 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 NCOA5Q9HCD5 579 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-232ENST00000584168 CTAGE9A4FU28 777 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ATP9BO43861 1147 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 SUPT3HO75486 399 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 BCRP11274 1271 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 DYNLL1P63167 89 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 FANCCQ00597 558 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 GUCY1A3Q02108 690 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 RCN1Q15293 331 aa13.02□□□□□ -0.32
CDK5RAP3-232ENST00000584168 ALS2CLQ60I27 953 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms