RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CUL5Q93034 780 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 SPATA33Q96N06 139 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 INPP4AQ96PE3 977 aaPredicted RBP13.32□□□□□ -0.28
SSH2-208ENST00000579040 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
SSH2-208ENST00000579040 PARNO95453 639 aaKnown RBP13.31□□□□□ -0.28
SSH2-208ENST00000579040 ICAM3P32942 547 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 PBX2P40425 430 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 MFSD10Q14728 455 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 GRIN2CQ14957 1233 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
SSH2-208ENST00000579040 DEFB128Q7Z7B8 93 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSH2-208ENST00000579040 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
SSH2-208ENST00000579040 C7orf31Q8N865 590 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 SMARCC2Q8TAQ2 1214 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 CTAGE1Q96RT6 745 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 PCDHA11Q9Y5I1 949 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
SSH2-208ENST00000579040 ZBBXA8MT70 800 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 DLL1O00548 723 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 CDC45O75419 566 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 ZNF286BP0CG31 522 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
SSH2-208ENST00000579040 MRPS9P82933 396 aaKnown RBP13.3□□□□□ -0.28
SSH2-208ENST00000579040 SP2Q02086 613 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 KIAA0753Q2KHM9 967 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 PCNX4Q63HM2 1172 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 SLC9A7Q96T83 725 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 GAS2L1Q99501 681 aaPredicted RBP13.3□□□□□ -0.28
SSH2-208ENST00000579040 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 MLXIPQ9HAP2 919 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 HDAC6Q9UBN7 1215 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 PTPRSQ13332 1948 aa13.3□□□□□ -0.28
SSH2-208ENST00000579040 SPATA31C2B4DYI2 1134 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 MEIS2O14770 477 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 FIBPO43427 364 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 SELPP16109 830 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 PTK7Q13308 1070 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 COL9A3Q14050 684 aaPredicted RBP13.29□□□□□ -0.28
SSH2-208ENST00000579040 NEDD9Q14511 834 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 KRT32Q14532 448 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 USP17L6PQ6QN14 398 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 TMTC3Q6ZXV5 915 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 TEX2Q8IWB9 1127 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 DHX38Q92620 1227 aaKnown RBP13.29□□□□□ -0.28
SSH2-208ENST00000579040 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
SSH2-208ENST00000579040 NEK1Q96PY6 1258 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
SSH2-208ENST00000579040 CHD9Q3L8U1 2897 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
SSH2-208ENST00000579040 RXRAP19793 462 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 METTL7BQ6UX53 244 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
SSH2-208ENST00000579040 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 PHOSPHO2Q8TCD6 241 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 SENP7Q9BQF6 1050 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 C16orf70Q9BSU1 422 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 FTOQ9C0B1 505 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSH2-208ENST00000579040 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
SSH2-208ENST00000579040 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
SSH2-208ENST00000579040 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
SSH2-208ENST00000579040 MICAL3Q7RTP6 2002 aa13.27□□□□□ -0.28
SSH2-208ENST00000579040 H3BRB1 525 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 SORBS3O60504 671 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 CXCL10P02778 98 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 LGALS2P05162 132 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 HMGB1P09429 215 aaKnown RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 CKBP12277 381 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 HOXC8P31273 242 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 RCAN1P53805 252 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 EXOSC10Q01780 885 aaKnown RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 TRIM71Q2Q1W2 868 aaKnown RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 CMTR1Q8N1G2 835 aaKnown RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 GPRASP2Q96D09 838 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 CDHR1Q96JP9 859 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 USP26Q9BXU7 913 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
SSH2-208ENST00000579040 TUT1Q9H6E5 874 aaKnown RBP13.27□□□□□ -0.29
SSH2-208ENST00000579040 RABGGTBP53611 331 aa13.26□□□□□ -0.29
SSH2-208ENST00000579040 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
SSH2-208ENST00000579040 CNKSR3Q6P9H4 555 aa13.26□□□□□ -0.29
SSH2-208ENST00000579040 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
SSH2-208ENST00000579040 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms