RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 MARCH6O60337 910 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 RGS20O76081 388 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 ZNF865P0CJ78 1059 aaPredicted RBP13.76□□□□□ -0.21
IFT20-207ENST00000578547 ARP10275 920 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 CYBAP13498 195 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 CYP3A7P24462 503 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
IFT20-207ENST00000578547 DNM1Q05193 864 aaKnown RBP13.76□□□□□ -0.21
IFT20-207ENST00000578547 PPP4R3AQ6IN85 833 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 MOXD1Q6UVY6 613 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 GPRASP2Q96D09 838 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 USP28Q96RU2 1077 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 PDGFCQ9NRA1 345 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 CLIC4Q9Y696 253 aa13.76□□□□□ -0.21
IFT20-207ENST00000578547 MEIS1O00470 390 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 FIBPO43427 364 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 SORBS3O60504 671 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
IFT20-207ENST00000578547 CNGA1P29973 690 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 CCND3P30281 292 aaPredicted RBP13.75□□□□□ -0.21
IFT20-207ENST00000578547 ADCYAP1R1P41586 468 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 SEMA3FQ13275 785 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 MTFR1Q15390 333 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 SF3A1Q15459 793 aaKnown RBP13.75□□□□□ -0.21
IFT20-207ENST00000578547 CALCRLQ16602 461 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 Q4G0T1 1027 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 TAPT1Q6NXT6 567 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 NIPA1Q7RTP0 329 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 SCFD2Q8WU76 684 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 GJA10Q969M2 543 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 LENG9Q96B70 501 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 ARMC5Q96C12 935 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 ZNF333Q96JL9 665 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 MBOAT7Q96N66 472 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
IFT20-207ENST00000578547 KCNH7Q9NS40 1196 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
IFT20-207ENST00000578547 KIAA1217Q5T5P2 1943 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 SPATA31C2B4DYI2 1134 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 MSH4O15457 936 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
IFT20-207ENST00000578547 KRT85P78386 507 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 PTGDRQ13258 359 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 TTLL4Q14679 1199 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 LY6KQ17RY6 165 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
IFT20-207ENST00000578547 LENG1Q96BZ8 264 aaPredicted RBP13.74□□□□□ -0.21
IFT20-207ENST00000578547 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 AGO4Q9HCK5 861 aaKnown RBP13.74□□□□□ -0.21
IFT20-207ENST00000578547 CEP131Q9UPN4 1083 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 HTTP42858 3142 aa13.74□□□□□ -0.21
IFT20-207ENST00000578547 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 DDX39AO00148 427 aaKnown RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 IPO5O00410 1097 aaKnown RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 ARIH2O95376 493 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 OR52Z1P0C646 297 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 CCL5P13501 91 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 PTGS1P23219 599 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 ICAM3P32942 547 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 SP4Q02446 784 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 ORC2Q13416 577 aaPredicted RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 STK38Q15208 465 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 GJC2Q5T442 439 aaPredicted RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 ETNPPLQ8TBG4 499 aa13.73□□□□□ -0.21
IFT20-207ENST00000578547 HMX1Q9NP08 348 aaPredicted RBP13.73□□□□□ -0.21
IFT20-207ENST00000578547 ATP9AO75110 1047 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 BAG4O95429 457 aaKnown RBP13.72□□□□□ -0.21
IFT20-207ENST00000578547 GGPS1O95749 300 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 BMP15O95972 392 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 AKR1A1P14550 325 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 KCNA2P16389 499 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 TXKP42681 527 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 ITGB3BPQ13352 177 aaPredicted RBP13.72□□□□□ -0.21
IFT20-207ENST00000578547 LRCH2Q5VUJ6 765 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 ATL3Q6DD88 541 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 KCNV1Q6PIU1 500 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 SLFN12Q8IYM2 578 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 HAS1Q92839 578 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 COPS5Q92905 334 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.72□□□□□ -0.21
IFT20-207ENST00000578547 RNF208Q9H0X6 261 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 KCNMB3Q9NPA1 279 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
IFT20-207ENST00000578547 TBX3O15119 743 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 MAFGO15525 162 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms