RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 GGPS1O95749 300 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CENPBP07199 599 aaPredicted RBP19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SP2Q02086 613 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 KIAA0753Q2KHM9 967 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 HSDL1Q3SXM5 330 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 C7orf31Q8N865 590 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 ZFP91Q96JP5 570 aaPredicted RBP19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SLC9A7Q96T83 725 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 ALG1Q9BT22 464 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MTA3Q9BTC8 594 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MYL10Q9BUA6 226 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SPZ1Q9BXG8 430 aa19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 FTOQ9C0B1 505 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PRC1O43663 620 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SORBS3O60504 671 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 TGFB3P10600 412 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SELPP16109 830 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 COL9A3Q14050 684 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 GPNMBQ14956 572 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 LRRC8DQ7L1W4 858 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PIBF1Q8WXW3 757 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SPATA33Q96N06 139 aa19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PRRC2BQ5JSZ5 2229 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PPFIA4O75335 1185 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 BAIAP3O94812 1187 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CA3P07451 260 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 KIF5BP33176 963 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PHOSPHO2Q8TCD6 241 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 INPP4AQ96PE3 977 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 ESYT1Q9BSJ8 1104 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PRDM6Q9NQX0 595 aa19.23■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CKBP12277 381 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MCM5P33992 734 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MRPS9P82933 396 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PTK7Q13308 1070 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 TRIM71Q2Q1W2 868 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 HERC6Q8IVU3 1022 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PPM1EQ8WY54 764 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 WNT8BQ93098 351 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 C16orf70Q9BSU1 422 aa19.22■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MUC3AQ02505 3323 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SLC27A2O14975 620 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 STAM2O75886 525 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PLEKHA8P1O95397 391 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PARNO95453 639 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 CXCL10P02778 98 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 IGFBP4P22692 258 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 ICAM3P32942 547 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 SEMA3FQ13275 785 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 HIC1Q14526 733 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 GNPTABQ3T906 1256 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 TRAF7Q6Q0C0 670 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 TMEM87BQ96K49 555 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 BCAS3Q9H6U6 928 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 MLXIPQ9HAP2 919 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 REV3LO60673 3130 aa19.21■□□□□ 0.67
CDK5RAP3-206ENST00000578018 PIK3CDO00329 1044 aa19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 NBNO60934 754 aa19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 ARHGEF15O94989 841 aa19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 WDR5P61964 334 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 ZNF200P98182 395 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 CREB3L3Q68CJ9 461 aa19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 NFXL1Q6ZNB6 911 aa19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 SRBD1Q8N5C6 995 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 LZTS2Q9BRK4 669 aa19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-206ENST00000578018 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 MEIS2O14770 477 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 LGALS2P05162 132 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 RXRAP19793 462 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 HOXC8P31273 242 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 LIFRP42702 1097 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 KCNJ6P48051 423 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 GNAQP50148 359 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 NECTIN1Q15223 517 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 CCDC85BQ15834 202 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 TCTN1Q2MV58 587 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 TJAP1Q5JTD0 557 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 CNKSR3Q6P9H4 555 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 TMTC2Q8N394 836 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 ANO2Q9NQ90 1003 aa19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 COL4A4P53420 1690 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-206ENST00000578018 MICAL3Q7RTP6 2002 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 H3BRB1 525 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 FIBPO43427 364 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 MBTPS1Q14703 1052 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 ZNF618Q5T7W0 954 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 PCNX4Q63HM2 1172 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 METTL7BQ6UX53 244 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 SERINC5Q86VE9 423 aa19.18■□□□□ 0.66
CDK5RAP3-206ENST00000578018 CMTR1Q8N1G2 835 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms