RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 MCM5P33992 734 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 PPP2R2DQ66LE6 453 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 PPM1EQ8WY54 764 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 TMEM87BQ96K49 555 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 ESYT1Q9BSJ8 1104 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 MTA3Q9BTC8 594 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 SEC63Q9UGP8 760 aaKnown RBP17.26■□□□□ 0.35
RN7SL560P-201ENST00000577943 CHD7Q9P2D1 2997 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 SLC27A2O14975 620 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 PPFIA4O75335 1185 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 F2P00734 622 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 IGFBP4P22692 258 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 SP2Q02086 613 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 HSDL1Q3SXM5 330 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 GNPTABQ3T906 1256 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 SMARCC2Q8TAQ2 1214 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 CUL5Q93034 780 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
RN7SL560P-201ENST00000577943 HAS3O00219 553 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 SELPP16109 830 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 GNAQP50148 359 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 CREB3L3Q68CJ9 461 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 DHX38Q92620 1227 aaKnown RBP17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 SLC9A7Q96T83 725 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 LZTS2Q9BRK4 669 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 CHD9Q3L8U1 2897 aa17.24■□□□□ 0.35
RN7SL560P-201ENST00000577943 STAM2O75886 525 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 PARNO95453 639 aaKnown RBP17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 CALM1P0DP23 149 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 CALM2P0DP24 149 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 CALM3P0DP25 149 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 CKBP12277 381 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 RXRAP19793 462 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 ADGRE1Q14246 886 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 PHOSPHO2Q8TCD6 241 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
RN7SL560P-201ENST00000577943 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 MICAL3Q7RTP6 2002 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 PLEKHA8P1O95397 391 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 LIFRP42702 1097 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 KCNJ6P48051 423 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 RBL2Q08999 1139 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 PTK7Q13308 1070 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 NECTIN1Q15223 517 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 LRRC2Q9BYS8 371 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
RN7SL560P-201ENST00000577943 PRRC2BQ5JSZ5 2229 aaKnown RBP17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 CA3P07451 260 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 ICAM3P32942 547 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 NEDD9Q14511 834 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 BMP2KLQ5H9B9 411 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 RNF20Q5VTR2 975 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 CMTR1Q8N1G2 835 aaKnown RBP17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 INPP4AQ96PE3 977 aaPredicted RBP17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
RN7SL560P-201ENST00000577943 H3BRB1 525 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 MEIS2O14770 477 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 FIBPO43427 364 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 LGALS2P05162 132 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 GPNMBQ14956 572 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 ZNF618Q5T7W0 954 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 PCNX4Q63HM2 1172 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 CNKSR3Q6P9H4 555 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 CENPQQ7L2Z9 268 aaPredicted RBP17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 CYFIP1Q7L576 1253 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 HERC6Q8IVU3 1022 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 TUT1Q9H6E5 874 aaKnown RBP17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 PRDM6Q9NQX0 595 aa17.2■□□□□ 0.34
RN7SL560P-201ENST00000577943 C17orf102A2RUQ5 167 aa17.19■□□□□ 0.34
RN7SL560P-201ENST00000577943 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
RN7SL560P-201ENST00000577943 NBNO60934 754 aa17.19■□□□□ 0.34
RN7SL560P-201ENST00000577943 WDR5P61964 334 aaKnown RBP17.19■□□□□ 0.34
RN7SL560P-201ENST00000577943 SEMA3FQ13275 785 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms