RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 CHMP4BP1P59074 171 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 ADCK5Q3MIX3 580 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 CHST3Q7LGC8 479 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 OTOP2Q7RTS6 562 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX42-204ENST00000577940 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
DDX42-204ENST00000577940 CTCFLQ8NI51 663 aaPredicted RBP9.63□□□□□ -0.87
DDX42-204ENST00000577940 IGDCC4Q8TDY8 1250 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 MYLIPQ8WY64 445 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 PIGSQ96S52 555 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 PDCD2LQ9BRP1 358 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 KATNAL1Q9BW62 490 aa9.63□□□□□ -0.87
DDX42-204ENST00000577940 UPF3BQ9BZI7 483 aaKnown RBP9.63□□□□□ -0.87
DDX42-204ENST00000577940 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 PARP14Q460N5 1801 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 CCDC69A6NI79 296 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 STAM2O75886 525 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 DDAH1O94760 285 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 PARNO95453 639 aaKnown RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 HOXA13P31271 388 aaPredicted RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 ARHGAP1Q07960 439 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 GRIN2CQ14957 1233 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 PTGISQ16647 500 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 NFXL1Q6ZNB6 911 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 MB21D2Q8IYB1 491 aaPredicted RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 C7orf31Q8N865 590 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 PPTC7Q8NI37 304 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 CAGE1Q8TC20 777 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 CUL5Q93034 780 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 RRP36Q96EU6 259 aaKnown RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 TMEM87BQ96K49 555 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 ZSCAN31Q96LW9 406 aaPredicted RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 GAS2L1Q99501 681 aaPredicted RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 PBX4Q9BYU1 374 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 WNT8AQ9H1J5 351 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 SLC28A3Q9HAS3 691 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 SEC63Q9UGP8 760 aaKnown RBP9.62□□□□□ -0.87
DDX42-204ENST00000577940 UMODL1Q5DID0 1318 aa9.62□□□□□ -0.87
DDX42-204ENST00000577940 ZBBXA8MT70 800 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 GRXCR1A8MXD5 290 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 OPLAHO14841 1288 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 IQCF3P0C7M6 154 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 CALM1P0DP23 149 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 CALM2P0DP24 149 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 CALM3P0DP25 149 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
DDX42-204ENST00000577940 PGM5Q15124 567 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 CELF3Q5SZQ8 465 aaKnown RBP9.61□□□□□ -0.87
DDX42-204ENST00000577940 XRRA1Q6P2D8 792 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 SYNE3Q6ZMZ3 975 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 PHOSPHO2Q8TCD6 241 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 SCLYQ96I15 445 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 SPATA33Q96N06 139 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 FTOQ9C0B1 505 aaKnown RBP eCLIP9.61□□□□□ -0.87
DDX42-204ENST00000577940 MLXIPQ9HAP2 919 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 CXXC1Q9P0U4 656 aaPredicted RBP9.61□□□□□ -0.87
DDX42-204ENST00000577940 LIMCH1Q9UPQ0 1083 aa9.61□□□□□ -0.87
DDX42-204ENST00000577940 COL11A1P12107 1806 aaPredicted RBP9.61□□□□□ -0.87
DDX42-204ENST00000577940 KIF28PB7ZC32 967 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 ATMINO43313 823 aaPredicted RBP9.6□□□□□ -0.87
DDX42-204ENST00000577940 PRC1O43663 620 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 CYTH3O43739 400 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 PBX2P40425 430 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 LIFRP42702 1097 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 PSEN2P49810 448 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 ANTXR2P58335 489 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 NEDD9Q14511 834 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 MYSM1Q5VVJ2 828 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 Q6ZUG5 572 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 DEFB128Q7Z7B8 93 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 ZNF654Q8IZM8 581 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 AFAP1L1Q8TED9 768 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 KAT2BQ92831 832 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 SPZ1Q9BXG8 430 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 LY9Q9HBG7 655 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 PCDHA11Q9Y5I1 949 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 SLC12A7Q9Y666 1083 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 TAF6LQ9Y6J9 622 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 SMCHD1A6NHR9 2005 aa9.6□□□□□ -0.87
DDX42-204ENST00000577940 MYH4Q9Y623 1939 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 BAIAP3O94812 1187 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 GGPS1O95749 300 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 HOXD8P13378 290 aaPredicted RBP9.59□□□□□ -0.87
DDX42-204ENST00000577940 SELPP16109 830 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 AK2P54819 239 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 EXOSC10Q01780 885 aaKnown RBP9.59□□□□□ -0.87
DDX42-204ENST00000577940 MFSD10Q14728 455 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 KIAA0753Q2KHM9 967 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 SLC35G1Q2M3R5 365 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 SMARCC2Q8TAQ2 1214 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 PIBF1Q8WXW3 757 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 SH2B1Q9NRF2 756 aaPredicted RBP9.59□□□□□ -0.87
DDX42-204ENST00000577940 GTF2IRD1Q9UHL9 959 aa9.59□□□□□ -0.87
DDX42-204ENST00000577940 PIK3CDO00329 1044 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms