RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 WDR11Q9BZH6 1224 aa15.39■□□□□ 0.05
NDE1-209ENST00000574109 DDX25Q9UHL0 483 aaKnown RBP15.39■□□□□ 0.05
NDE1-209ENST00000574109 CIZ1Q9ULV3 898 aaPredicted RBP15.39■□□□□ 0.05
NDE1-209ENST00000574109 ATP6V1DQ9Y5K8 247 aa15.39■□□□□ 0.05
NDE1-209ENST00000574109 NFASCO94856 1347 aa15.39■□□□□ 0.05
NDE1-209ENST00000574109 IGLV3-22A0A075B6J6 115 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 SPATA31C2B4DYI2 1134 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 KIF28PB7ZC32 967 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 LAD1O00515 517 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 NEMFO60524 1076 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 CCNT1O60563 726 aaKnown RBP15.38■□□□□ 0.05
NDE1-209ENST00000574109 RGS20O76081 388 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 GH1P01241 217 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
NDE1-209ENST00000574109 TXNP10599 105 aaKnown RBP15.38■□□□□ 0.05
NDE1-209ENST00000574109 NUCB2P80303 420 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 TRIM32Q13049 653 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 TTC38Q5R3I4 469 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 CCDC62Q6P9F0 684 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 PLA2G4DQ86XP0 818 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 SPRYD3Q8NCJ5 442 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 TRPV1Q8NER1 839 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 RNF208Q9H0X6 261 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 KCNH7Q9NS40 1196 aa15.38■□□□□ 0.05
NDE1-209ENST00000574109 FAM86B1E9PN63 330 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 GJB1P08034 283 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 FAM86B2P0C5J1 330 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 UBA1P22314 1058 aaKnown RBP15.37■□□□□ 0.05
NDE1-209ENST00000574109 CCND3P30281 292 aaPredicted RBP15.37■□□□□ 0.05
NDE1-209ENST00000574109 ADCYAP1R1P41586 468 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 RESTQ13127 1097 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 PRR16Q569H4 304 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 MYSM1Q5VVJ2 828 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 TLK2Q86UE8 772 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 SLFN12Q8IYM2 578 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 SDF4Q9BRK5 362 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 TMEM106CQ9BVX2 250 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 UNC93B1Q9H1C4 597 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
NDE1-209ENST00000574109 TBC1D22BQ9NU19 505 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 CEP131Q9UPN4 1083 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 GNEQ9Y223 722 aaKnown RBP15.37■□□□□ 0.05
NDE1-209ENST00000574109 TCHHQ07283 1943 aa15.37■□□□□ 0.05
NDE1-209ENST00000574109 IPO5O00410 1097 aaKnown RBP15.36■□□□□ 0.05
NDE1-209ENST00000574109 TDP2O95551 362 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 F13A1P00488 732 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
NDE1-209ENST00000574109 CPT1AP50416 773 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 NKX3-2P78367 333 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 LAMC2Q13753 1193 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 EARS2Q5JPH6 523 aaKnown RBP15.36■□□□□ 0.05
NDE1-209ENST00000574109 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 ATL3Q6DD88 541 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 METTL7BQ6UX53 244 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 LENG9Q96B70 501 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 FAM20AQ96MK3 541 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
NDE1-209ENST00000574109 RIT2Q99578 217 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 ZNF577Q9BSK1 485 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 AP5M1Q9H0R1 490 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 XPNPEP3Q9NQH7 507 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
NDE1-209ENST00000574109 DDX41Q9UJV9 622 aaKnown RBP15.36■□□□□ 0.05
NDE1-209ENST00000574109 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 FAM205CA6NFA0 338 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 ZEB2O60315 1214 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
NDE1-209ENST00000574109 BRD1O95696 1058 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 KCNA2P16389 499 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 SMPD1P17405 629 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 GJA9P57773 515 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 KRT76Q01546 638 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 SEMA3FQ13275 785 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
NDE1-209ENST00000574109 RNF180Q86T96 592 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 FERMT3Q86UX7 667 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
NDE1-209ENST00000574109 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 ARRDC4Q8NCT1 418 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 OR6J1Q8NGC5 347 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 PPTC7Q8NI37 304 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 AGO4Q9HCK5 861 aaKnown RBP15.35■□□□□ 0.05
NDE1-209ENST00000574109 JPH1Q9HDC5 661 aaPredicted RBP15.35■□□□□ 0.05
NDE1-209ENST00000574109 KCNMB3Q9NPA1 279 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
NDE1-209ENST00000574109 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
NDE1-209ENST00000574109 KAT6AQ92794 2004 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 NOP56O00567 594 aaKnown RBP15.34■□□□□ 0.05
NDE1-209ENST00000574109 GAS7O60861 476 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 FARP2O94887 1054 aaPredicted RBP15.34■□□□□ 0.05
NDE1-209ENST00000574109 ARIH2O95376 493 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 GGPS1O95749 300 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 DDIT3P35638 169 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 GJA8P48165 433 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 MTFR1Q15390 333 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 CALCRLQ16602 461 aa15.34■□□□□ 0.05
NDE1-209ENST00000574109 COL13A1Q5TAT6 717 aaPredicted RBP15.34■□□□□ 0.05
NDE1-209ENST00000574109 PCSK9Q8NBP7 692 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms