RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 CHD7Q9P2D1 2997 aa20.02■□□□□ 0.8
LITAF-211ENST00000572255 FRMPD4Q14CM0 1322 aa20.02■□□□□ 0.79
LITAF-211ENST00000572255 MYO9BQ13459 2157 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 HOXD8P13378 290 aaPredicted RBP20.01■□□□□ 0.79
LITAF-211ENST00000572255 LIFRP42702 1097 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 MFSD10Q14728 455 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 SRBD1Q8N5C6 995 aaKnown RBP20.01■□□□□ 0.79
LITAF-211ENST00000572255 CCDC155Q8N6L0 562 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 C7orf31Q8N865 590 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 GPKOWQ92917 476 aaPredicted RBP eCLIP20.01■□□□□ 0.79
LITAF-211ENST00000572255 ALG1Q9BT22 464 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 NKX2-4Q9H2Z4 354 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 HDAC6Q9UBN7 1215 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
LITAF-211ENST00000572255 GTF2IRD1Q9UHL9 959 aa20.01■□□□□ 0.79
LITAF-211ENST00000572255 HAS3O00219 553 aa20■□□□□ 0.79
LITAF-211ENST00000572255 PPFIA4O75335 1185 aa20■□□□□ 0.79
LITAF-211ENST00000572255 CALM1P0DP23 149 aa20■□□□□ 0.79
LITAF-211ENST00000572255 CALM2P0DP24 149 aa20■□□□□ 0.79
LITAF-211ENST00000572255 CALM3P0DP25 149 aa20■□□□□ 0.79
LITAF-211ENST00000572255 ACTN1P12814 892 aa20■□□□□ 0.79
LITAF-211ENST00000572255 RXRAP19793 462 aa20■□□□□ 0.79
LITAF-211ENST00000572255 RABGGTBP53611 331 aa20■□□□□ 0.79
LITAF-211ENST00000572255 MRPS9P82933 396 aaKnown RBP20■□□□□ 0.79
LITAF-211ENST00000572255 KIAA0753Q2KHM9 967 aa20■□□□□ 0.79
LITAF-211ENST00000572255 HSDL1Q3SXM5 330 aa20■□□□□ 0.79
LITAF-211ENST00000572255 CAGE1Q8TC20 777 aa20■□□□□ 0.79
LITAF-211ENST00000572255 AFAP1L1Q8TED9 768 aa20■□□□□ 0.79
LITAF-211ENST00000572255 LRRC2Q9BYS8 371 aa20■□□□□ 0.79
LITAF-211ENST00000572255 TET1Q8NFU7 2136 aa20■□□□□ 0.79
LITAF-211ENST00000572255 STAM2O75886 525 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 ATP2A2P16615 1042 aaKnown RBP19.99■□□□□ 0.79
LITAF-211ENST00000572255 GNPTABQ3T906 1256 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 USP17L6PQ6QN14 398 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 RAB11FIP4Q86YS3 637 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 CMTR1Q8N1G2 835 aaKnown RBP19.99■□□□□ 0.79
LITAF-211ENST00000572255 SMARCC2Q8TAQ2 1214 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 DHX38Q92620 1227 aaKnown RBP19.99■□□□□ 0.79
LITAF-211ENST00000572255 CUL5Q93034 780 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 INPP4AQ96PE3 977 aaPredicted RBP19.99■□□□□ 0.79
LITAF-211ENST00000572255 FTOQ9C0B1 505 aaKnown RBP eCLIP19.99■□□□□ 0.79
LITAF-211ENST00000572255 PRDM12Q9H4Q4 367 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 MLXIPQ9HAP2 919 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 SLC28A3Q9HAS3 691 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
LITAF-211ENST00000572255 RNF20Q5VTR2 975 aa19.98■□□□□ 0.79
LITAF-211ENST00000572255 GAS2L1Q99501 681 aaPredicted RBP19.98■□□□□ 0.79
LITAF-211ENST00000572255 PCDHA11Q9Y5I1 949 aa19.98■□□□□ 0.79
LITAF-211ENST00000572255 DOCK5Q9H7D0 1870 aa19.98■□□□□ 0.79
LITAF-211ENST00000572255 PIK3CDO00329 1044 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 MEIS2O14770 477 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 MYOGP15173 224 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 SELPP16109 830 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 ICAM3P32942 547 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 RBL2Q08999 1139 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 LRRC8DQ7L1W4 858 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 SGMS1Q86VZ5 419 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 BCAS3Q9H6U6 928 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 RTEL1Q9NZ71 1219 aa19.97■□□□□ 0.79
LITAF-211ENST00000572255 SPATA31C2B4DYI2 1134 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 FIBPO43427 364 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 CKBP12277 381 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 SEMA3FQ13275 785 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 PTK7Q13308 1070 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 PCNX4Q63HM2 1172 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 TMTC3Q6ZXV5 915 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 MICU3Q86XE3 530 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 FANCBQ8NB91 859 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 SLC9A7Q96T83 725 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 C16orf70Q9BSU1 422 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 TRANK1O15050 2925 aa19.96■□□□□ 0.79
LITAF-211ENST00000572255 hCG_1642624A0A1W2PR95 340 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 NOP56O00567 594 aaKnown RBP19.95■□□□□ 0.78
LITAF-211ENST00000572255 CDC45O75419 566 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 ZNF200P98182 395 aaPredicted RBP19.95■□□□□ 0.78
LITAF-211ENST00000572255 NEDD9Q14511 834 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 GPNMBQ14956 572 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 PPP2R2DQ66LE6 453 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 XRRA1Q6P2D8 792 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 CCDC82Q8N4S0 544 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 USP38Q8NB14 1042 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 NEK1Q96PY6 1258 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 PSTPIP2Q9H939 334 aa19.95■□□□□ 0.78
LITAF-211ENST00000572255 BAIAP3O94812 1187 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 PARNO95453 639 aaKnown RBP19.94■□□□□ 0.78
LITAF-211ENST00000572255 LGALS2P05162 132 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 ADGRE1Q14246 886 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 HIC1Q14526 733 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 TRIM71Q2Q1W2 868 aaKnown RBP19.94■□□□□ 0.78
LITAF-211ENST00000572255 METTL7BQ6UX53 244 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 CYFIP1Q7L576 1253 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 PHOSPHO2Q8TCD6 241 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 WNT8BQ93098 351 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 COL25A1Q9BXS0 654 aaPredicted RBP19.94■□□□□ 0.78
LITAF-211ENST00000572255 PTPRSQ13332 1948 aa19.94■□□□□ 0.78
LITAF-211ENST00000572255 H3BRB1 525 aa19.93■□□□□ 0.78
LITAF-211ENST00000572255 EXOSC10Q01780 885 aaKnown RBP19.93■□□□□ 0.78
LITAF-211ENST00000572255 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
LITAF-211ENST00000572255 RASEFQ8IZ41 740 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms