RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 NR5A1Q13285 461 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 AP3B2Q13367 1082 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 TTLL4Q14679 1199 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 FSCN1Q16658 493 aaKnown RBP7.99□□□□□ -1.13
SMG6-209ENST00000571442 GNASQ5JWF2 1037 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 KRT40Q6A162 431 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 CPLX2Q6PUV4 134 aaKnown RBP7.99□□□□□ -1.13
SMG6-209ENST00000571442 CXCL17Q6UXB2 119 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 DNAH12Q6ZR08 3092 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 RNF180Q86T96 592 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 BLIDQ8IZY5 108 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
SMG6-209ENST00000571442 DAGLBQ8NCG7 672 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 ARRDC4Q8NCT1 418 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 GJA10Q969M2 543 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 ZSCAN31Q96LW9 406 aaPredicted RBP7.99□□□□□ -1.13
SMG6-209ENST00000571442 MXRA8Q9BRK3 442 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 JADE2Q9NQC1 790 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
SMG6-209ENST00000571442 PKD2L1Q9P0L9 805 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 Q9Y3F1 56 aa7.99□□□□□ -1.13
SMG6-209ENST00000571442 A6NJR5 290 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 B4DLN1 442 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 KBTBD13C9JR72 458 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 H0YGN5 161 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 ST18O60284 1047 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 TDP2O95551 362 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 FOSP01100 380 aaPredicted RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 GH1P01241 217 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 MMP3P08254 477 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 CYP3A4P08684 503 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 GNA11P29992 359 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 PURAQ00577 322 aaKnown RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 ITGB3BPQ13352 177 aaPredicted RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 SNX17Q15036 470 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 HSDL1Q3SXM5 330 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 TRIM60Q495X7 471 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 CELF3Q5SZQ8 465 aaKnown RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 SLC39A5Q6ZMH5 540 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 CCDC148Q8NFR7 591 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 TBCKQ8TEA7 893 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 CCDC12Q8WUD4 166 aaPredicted RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 DPF3Q92784 378 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 KAT2BQ92831 832 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 LENG9Q96B70 501 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 MPHOSPH6Q99547 160 aaKnown RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 TSEN34Q9BSV6 310 aaKnown RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 HTATIP2Q9BUP3 242 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 AP5M1Q9H0R1 490 aa7.98□□□□□ -1.13
SMG6-209ENST00000571442 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
SMG6-209ENST00000571442 WDR81Q562E7 1941 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 TRIP12Q14669 1992 aaPredicted RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 BTBD18B2RXH4 712 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 KIF28PB7ZC32 967 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 MEIS1O00470 390 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 NKRFO15226 690 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMG6-209ENST00000571442 FIBPO43427 364 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 STAM2O75886 525 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 MMP1P03956 469 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 MYL3P08590 195 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 ZNF286BP0CG31 522 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 HOXD8P13378 290 aaPredicted RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 ITGB8P26012 769 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 CIITAP33076 1130 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 FXR1P51114 621 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMG6-209ENST00000571442 RTP1P59025 263 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 SP4Q02446 784 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 CUL4AQ13619 759 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 HIC1Q14526 733 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 INF2Q27J81 1249 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 CEP55Q53EZ4 464 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 XRRA1Q6P2D8 792 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 PIK3AP1Q6ZUJ8 805 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 CYFIP1Q7L576 1253 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 SH3RF1Q7Z6J0 888 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 TRIM50Q86XT4 487 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 DHX37Q8IY37 1157 aaKnown RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 C7orf61Q8IZ16 206 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 EMID1Q96A84 441 aaPredicted RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 GPRASP2Q96D09 838 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 LLPHQ9BRT6 129 aaKnown RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 GLT8D2Q9H1C3 349 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 AGO4Q9HCK5 861 aaKnown RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 KCNH7Q9NS40 1196 aa7.97□□□□□ -1.13
SMG6-209ENST00000571442 RANBP2P49792 3224 aaKnown RBP7.97□□□□□ -1.13
SMG6-209ENST00000571442 GSTTP1A0A1W2PQM5 241 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 DDX39AO00148 427 aaKnown RBP7.96□□□□□ -1.14
SMG6-209ENST00000571442 DHX15O43143 795 aaKnown RBP7.96□□□□□ -1.14
SMG6-209ENST00000571442 SLC37A4O43826 429 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 CCNE2O96020 404 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 TGFB3P10600 412 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 SYN1P17600 705 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 CAPN2P17655 700 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 GJB2P29033 226 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 CDK7P50613 346 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms